DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and fab1

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_611269.1 Gene:fab1 / 37033 FlyBaseID:FBgn0028741 Length:1809 Species:Drosophila melanogaster


Alignment Length:533 Identity:104/533 - (19%)
Similarity:172/533 - (32%) Gaps:174/533 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 GITVANNVQLGNRRQDMGVQLLRQATNNTNNKVGDGTTTATIL---ARGIACQGMHVLRQSKVNV 128
            |.:.::|....:......|:.|...|:..|    .|.|.:.:|   :..:|.:..:.||..| :.
  Fly   118 GTSTSSNTAAEDSETSDRVETLPLPTSEAN----QGRTVSNVLKHISNIVATKNNNDLRNYK-DT 177

  Fly   129 QLLREGILEGSRAVCDALGEMSQSVDTI------------------GQVEAVAKVALNGDERLAE 175
            :|.|..:.:.....|   .:.||...|.                  .||.....:..:||.::..
  Fly   178 ELQRFWMPDSKAKEC---YDCSQKFSTFRRKHHCRLCGQIFCSKCCNQVVPGMIIRCDGDLKVCN 239

  Fly   176 LIGDII-------------------------LELGDSGVILLKESHSPFDEAKIQEGITIASGYY 215
            ....|:                         ||:.|||..|.|  |.....|.:....::  ||.
  Fly   240 YCSKIVLTFLKSSSSEMGQDMQELQQHLSNKLEVQDSGSSLAK--HPQMQRAPLPRKTSV--GYQ 300

  Fly   216 SPFFAK-----------QSHTLELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGS 269
            ...|:.           :.:.|:..|.|:.|.    :::::.||               |:|.|.
  Fly   301 EERFSSHPTYTTLSIDDRKNILQQSNSLITLH----EEMQRDLP---------------AQNCGQ 346

  Fly   270 DLLKILVLNNLQ-GRVQVCAV----KAPSFGDEQCEEMEDIAFATGGHLLEDASSLADLS----- 324
            .|::.|..||.. ..||..|:    .|..|.:....:.|.:.|.:..|.....||.:|.|     
  Fly   347 RLIEFLNSNNKSANEVQAVAILNAMLAAGFLEPIVPDPEQMDFDSSLHYKFSKSSSSDTSRTMSP 411

  Fly   325 --------EEDLGEVMEAVVDAKE-----------------THLLQPINVNEEQVQCRIQDIREL 364
                    |....:.|:...:.||                 :.||.....:|||:..::.....|
  Fly   412 QFEANPHAEPQPPKSMDQSAEEKEKELENELENDRCYTTATSKLLASYCEHEEQLLAQMLRAHNL 476

  Fly   365 IDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVAISDGVVPGG-- 427
                  |.|.|::   |..|....|..|           :.:..::.|..:|..::...||||  
  Fly   477 ------DQEWDKV---LQMLCSTAANHF-----------KPEHCSNDLMDIRNYVNFKKVPGGRR 521

  Fly   428 -------GTAYLRCIPVLD---ELPPTDIMELQ------------VGREIV----KDALRLPCYT 466
                   |.|:.:.:...|   .:|...|:.||            |..|.|    |:.||..|  
  Fly   522 KDSKIVHGVAFSKNVAHKDMATHVPFPRILLLQCPIVYERIEGKFVTIETVLLQEKEYLRNVC-- 584

  Fly   467 IARNAGVDPNEVL 479
             ||.....||.||
  Fly   585 -ARIMSFKPNVVL 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 104/533 (20%)
fab1NP_611269.1 FYVE_PIKfyve_Fab1 182..243 CDD:277264 8/63 (13%)
DEP 329..397 CDD:214489 18/86 (21%)
Fab1_TCP 464..717 CDD:239450 36/156 (23%)
PIPKc_PIKfyve 1479..1796 CDD:340437
Blue background indicates that the domain is not in the aligned region.

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