DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and CCT4

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_609579.1 Gene:CCT4 / 34674 FlyBaseID:FBgn0032444 Length:533 Species:Drosophila melanogaster


Alignment Length:574 Identity:126/574 - (21%)
Similarity:227/574 - (39%) Gaps:130/574 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNRRQDMGVQLLR 89
            :.|...:|....:::|:.|:|||:|.:.:|:.......||.||.|:...:.:.:....|.|:|.|
  Fly    25 DVRLSNIQAAKAVSDAIRTSLGPRGMDKMIQAGNGEVSITNDGATILKQMNVLHPAAKMLVELSR 89

  Fly    90 QATNNTNNKVGDGTTTATILARGI--ACQ-----GMH-----------------VLRQSKVNVQL 130
            .    .:...|||||:..::|..:  ||:     |:|                 :|:|....::|
  Fly    90 A----QDVAAGDGTTSVVVIAGALLEACEKLLQKGLHPTAISDSFQRCSNKAVEILKQMSTPIEL 150

  Fly   131 -LREGILEGSRAVCDA--LGEMSQSVDTIGQVEAVAKVALNGDERLAEL--------IGDII--L 182
             .||.:::.:....::  :.:.|..:..|. |:||.||...|.|...:|        :|..:  .
  Fly   151 DDRETLIKSASTSLNSKVVSQQSSLLAPIA-VDAVLKVTDPGKETSVDLKNIKVISSLGGTVEDT 214

  Fly   183 ELGDSGVILLKE--SHSP--FDEAKIQEGITIASGYYSPFFAKQSHTLELENCLLLLTLAKIDQV 243
            ||.|..|...:.  |::|  .::|||  |:.        .|...:...::::.:::...|.:|:|
  Fly   215 ELVDGLVFTCRSAGSNAPKRIEKAKI--GLI--------QFCISAPKTDMDHNVIVSDYAAMDRV 269

  Fly   244 -----EQILPALELARLKERPLLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEME 303
                 ..||..::..:.....:|::.|:...|.:..|..:.|. :::...||.        .|.|
  Fly   270 LKEERSYILNIVKQIKKSGCNVLLVQKSILRDAVSDLAQHFLD-KIKCMVVKD--------VERE 325

  Fly   304 DIAF----------ATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQVQCRI 358
            ||.|          |:..|...:..|.|||.||......:.|                     :|
  Fly   326 DIEFVCKTLHCRPIASLDHFTAENLSSADLVEEVASGTNKFV---------------------KI 369

  Fly   359 QDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVAIS-DG 422
            ..|:.:                     |...:|...|:::|.:.|.....:|||..||..:. ..
  Fly   370 TGIQNM---------------------GRTVSIICRGSNKLVLEEAARSLHDALCVVRCLVKLRA 413

  Fly   423 VVPGGGTAYLRCIPVLDELPPT-DIMELQVGREIVKDALRLPCYTIARNAGVDP----NEVLRRV 482
            .:.|||...:.....|..|..| :.::....|... |||.:...|:|.|||::|    .|:..|.
  Fly   414 QIVGGGAPEIEMALQLAALAQTVEGVDAYCFRAFA-DALEVIPSTLAENAGLNPIATVTELRNRH 477

  Fly   483 LKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAA-GIASLLATTEVLIT 535
            .:|..|.|.:...|...|:....:|.|..|..|::|.|. .|.|:|...:::.|
  Fly   478 AQGEKNAGINVRKGAITDIFAENVVQPLLVSISSITLATETIRSILKIDDIVNT 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 126/574 (22%)
GroEL 18..536 CDD:239460 126/574 (22%)
CCT4NP_609579.1 TCP1_delta 18..531 CDD:239454 125/572 (22%)
Cpn60_TCP1 37..529 CDD:278544 123/558 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453413
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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