DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and cct5

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:586 Identity:121/586 - (20%)
Similarity:233/586 - (39%) Gaps:141/586 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISP----RITKDGITVANNVQLGNRRQDM 83
            |.||....:.....:||.:.|:|||.|    ::::::..    .:|.||.|:.:.:.:.::...:
Zfish    30 GLEALKSHILAAKAVANTLRTSLGPNG----LDKMMVDKDGEVTVTNDGATILSMMDVDHQIAKL 90

  Fly    84 GVQLLRQATNNTNNKVGDGTTTATILARGIACQ-------GMHVLRQSKVNVQLLREGILEGSRA 141
            .|:|    :.:.::::|||||...:||..:..|       |:|.:|        :.:|..:.::.
Zfish    91 MVEL----SKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIR--------IADGYDQAAKI 143

  Fly   142 VCDALGEMSQS--VD-------------TIGQV------EAVAKVALNG------------DERL 173
            ..:.|.::..|  ||             |:|..      ..:|::|:|.            |..|
Zfish   144 AIEQLDKIGDSFPVDPNNTESLVQTAMTTLGSKVINRCHRQMAEIAVNAILTVADMERKDVDFEL 208

  Fly   174 AELIGDIILELGDS----GVILLKE-SHSPFDEAKIQEGITIASGYYSPFFAKQSHTLELENCLL 233
            .::.|.:..:|.|:    |||:.|| ||....:......|.|.:..:.|...|..|.|::.:...
Zfish   209 IKVEGKVGGKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVED 273

  Fly   234 LLTLAKI--DQVEQILPALELARLKER--PLLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSF 294
            ...|.|.  |:.:::     :.::||.  .|.|....|..:...:|:.|.|..   :..|..|  
Zfish   274 YKALQKYEKDKFQEM-----IRQVKENGANLAICQWGFDDEANHLLLQNELPA---IRWVGGP-- 328

  Fly   295 GDEQCEEMEDIAFATGGHLLEDASSLADLSEEDLGE---VMEAVVDAKETHLLQPINVNEEQVQC 356
                  |:|.||.||||.::   ....:|:.|.||.   |.|......:..:|    |.||   |
Zfish   329 ------EIELIAIATGGRIV---PRFCELTPEKLGTAGLVKEICFGTTKDRML----VIEE---C 377

  Fly   357 RIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVAISD 421
            :                           .....|||:.|.:::.:.|.|...:|||..:|..:.|
Zfish   378 K---------------------------NSRAVTIFIRGGNKMIIEEAKRALHDALCVIRNLVRD 415

  Fly   422 G-VVPGGGTAYLRCI----PVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAGVDPNEVL-- 479
            . :|.|||.:.:.|.    ...|:.|..:    |.......|||.:....:|.|:|::|.:.:  
Zfish   416 NRIVYGGGASEIACALAVNEAADKCPSLE----QYAMRAFADALEVIPMALAENSGLNPIQTMTE 476

  Fly   480 ---RRVLKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQPTKP 541
               |:|.:.:...|.|.......|:..:.:::.....:..::.|..:..::...:.:  :.|.:|
Zfish   477 VRARQVKENNSALGIDCLHLSTNDMKQQHVIETLIGKKQQISLATQVVKMILKIDDI--RGPGEP 539

  Fly   542 K 542
            :
Zfish   540 E 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 119/578 (21%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 119/579 (21%)

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