DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and CCT2

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:570 Identity:123/570 - (21%)
Similarity:232/570 - (40%) Gaps:113/570 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISP-------RITKDGITVANNVQLGNRRQDM 83
            ||.....|...:.:.|.:||||||    ::::|::.       .:|.||.|:...|.:.|    .
  Fly    23 ARLSSFIGAIAIGDLVKSTLGPKG----MDKILVATGRNAGHVEVTNDGATILRAVGVDN----P 79

  Fly    84 GVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGE 148
            ..::|...:...:.:||||||:.|:||..:..:...::.| |::.|::..|..:.::...:||..
  Fly    80 AAKILVDMSRVQDEEVGDGTTSVTVLASELLREAEKLVEQ-KLHPQIIVSGWRQATQVALEALTA 143

  Fly   149 MSQ---SVD--------TIGQVEAVAKVALNGDERLAELIGDIILELGDSG----VILLKESHSP 198
            .:|   |.|        .|.:....:|:.....:..|.|..|.::.|..||    :.::|:|...
  Fly   144 AAQDNSSSDEKFRNDLLNIARTTLSSKILHQHKDFFANLAVDAVMRLKGSGELKSIQIIKKSGGT 208

  Fly   199 FDEAKIQEGITI--ASGYYSPFFAKQSHTLELENCLLLL--------------TLAKIDQVEQI- 246
            ..::.:.||..:  ..|.:.|        ..:||..:|:              :..|:|.:.:| 
  Fly   209 LGDSFLDEGFLLDKKPGVHQP--------QRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIA 265

  Fly   247 -LPALELARLKERPLLIIAKNFGSDLLKILVLN---NLQGRVQVCAVKAPSFGDEQCEEMEDIAF 307
             |...|..::||:...|:.......:.:.|:.|   .|....:|.:::...|     :.:|.:|:
  Fly   266 DLEMAEKEKMKEKVDKILKHKCNVFINRQLIYNYPEQLFADARVMSIEHADF-----DGIERLAY 325

  Fly   308 ATGGHLLE--DASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFT 370
            .|||.::.  :..||..|.|.|   |:|.|:..::|.|                        .|:
  Fly   326 CTGGEIVSTFENPSLVKLGECD---VIEQVMIGEDTLL------------------------RFS 363

  Fly   371 DVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVAISDG-VVPGGG-TAYLR 433
            .|:|           |...||.:.|.::..:.|.....:|||..:...:.:. ::.||| :..|.
  Fly   364 GVKL-----------GEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALM 417

  Fly   434 CIPVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAGVDPNEVLRRV----LKGSGNYGYDAA 494
            ...||.:...|...|........:..|.||. .||.|||.|..:::..:    .:|....|.|..
  Fly   418 ATAVLKKAAETPGKEAIAIEAFARALLSLPT-AIADNAGYDSAQLVSELRAGHAQGKQTLGLDME 481

  Fly   495 AGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQPTKPKIP 544
            .|:..|:...||.:...|.:..:.||:..|.::...:.:|...|.: ::|
  Fly   482 LGKVADVRELGITESFAVKRQVLMSASEAAEMILRVDNIIRCAPRR-RVP 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 123/570 (22%)
GroEL 18..536 CDD:239460 121/560 (22%)
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 122/568 (21%)
TCP1_beta 10..527 CDD:239452 122/564 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453443
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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