DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and Cct7

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001100073.1 Gene:Cct7 / 297406 RGDID:1306422 Length:544 Species:Rattus norvegicus


Alignment Length:590 Identity:132/590 - (22%)
Similarity:229/590 - (38%) Gaps:125/590 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSRLGRSGRAGVRTFANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPR--- 62
            :|.:.|.....|:....::|     :.|      .|:|.||.|||||:|    :::|::..|   
  Rat     7 ILLKEGTDSSQGIPQLVSNI-----SAC------QVIAEAVRTTLGPRG----MDKLIVDGRGKA 56

  Fly    63 -ITKDGITVANNVQLGNRRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQ-------GMH 119
             |:.||.|:...:.:.:    ...:.|.....:.:.:||||||:.|:||.....|       |:|
  Rat    57 TISNDGATILKLLDVVH----PAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLH 117

  Fly   120 ---VLRQSKVNVQLLREGILEGSRAVCDALGEMSQSVDTIGQVEAVAKVALN----GDERL--AE 175
               ::|..:...||....|.|.:..|     :....|:....:|..|..||:    ..:::  |:
  Rat   118 PQIIIRAFRTATQLAVNKIKEIAVTV-----KKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAK 177

  Fly   176 LIGDIILELGD----SGVILLKESHSPFDEAKIQEGITI------------ASGYYSPFFAKQSH 224
            ::.|.::.|.:    ..:.:.|......:|:::..|:..            ...|.:|..|..:.
  Rat   178 MVVDAVMMLDELLQLKMIGIKKVQGGALEESRLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNV 242

  Fly   225 TLELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAK-NFGSDLLKILVLNNLQGRVQVCA 288
            .|||:        |:.|..|     :.:..:::...::.|: |...|.|:.:    .|...:|..
  Rat   243 ELELK--------AEKDNAE-----IRVHTVEDYQAIVDAEWNILYDKLEKI----HQSGAKVIL 290

  Fly   289 VKAPSFGDEQCEEMEDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQ 353
            .|.| .||...:...|          .|......:.||||...|.|...:.:|    .:|.....
  Rat   291 SKLP-IGDVATQYFAD----------RDMFCAGRVPEEDLKRTMMACGGSIQT----SVNALIPD 340

  Fly   354 VQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVA 418
            |..|.|...|      |.:..:|.....|..:....||.:.|.:|..:.|.:...:||:..||.|
  Rat   341 VLGRCQVFEE------TQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRA 399

  Fly   419 I-SDGVVPGGGTA----------YLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAG 472
            | :|.||.|||..          |.|.||        ...:|.:|  ....||.:....:..|||
  Rat   400 IKNDSVVAGGGAIEMELSKYLRDYSRTIP--------GKQQLLIG--AYAKALEIIPRQLCDNAG 454

  Fly   473 VDPNEVLRRV----LKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVL 533
            .|...:|.::    .:|...||.|....:..|.....:.:|..|..:|:|:|:..|.|:.:.:..
  Rat   455 FDATNILNKLRARHAQGGMWYGVDINNEDIADNFQAFVWEPAMVRINALTAASEAACLIVSVDET 519

  Fly   534 ITKQP 538
            | |.|
  Rat   520 I-KNP 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 129/578 (22%)
GroEL 18..536 CDD:239460 127/569 (22%)
Cct7NP_001100073.1 TCP1_eta 5..525 CDD:239456 132/590 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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