DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and Cct3

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_954522.1 Gene:Cct3 / 295230 RGDID:735038 Length:545 Species:Rattus norvegicus


Alignment Length:574 Identity:117/574 - (20%)
Similarity:215/574 - (37%) Gaps:135/574 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MQGVNVLANAVATTLGPKGRNVLIEQLLISPR----ITKDGITVANNVQLGNRRQDMGVQLLRQA 91
            :.....:|:.:.|.||||.    :.::|:.|.    :|.||..:...:|:    |....:.:.:.
  Rat    27 INAAKTIADIIRTCLGPKS----MMKMLLDPMGGIVMTNDGNAILREIQV----QHPAAKSMIEI 83

  Fly    92 TNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCD----ALGEMSQS 152
            :...:.:||||||:..|||..:.....|.|.|     |:....::...|...|    .|.::|..
  Rat    84 SRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQ-----QMHPTVVISAYRMALDDMVSTLKKISTP 143

  Fly   153 VDTIGQ---------------------------VEAVAKVAL--NGDE--------RLAELIGDI 180
            ||...:                           ::||..|..  ||.:        |:.::.|.|
  Rat   144 VDVNNRDMMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGI 208

  Fly   181 ILELGDS----GVILLKESHSPFDEAKIQEGITIASGYYSPFFAKQSHT-LEL---ENCLLLLTL 237
            |   .||    ||::.|:...|.....|:....:.......:...:|.| :|:   |:...:|.:
  Rat   209 I---EDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQM 270

  Fly   238 AKIDQVEQILPALELARLKERPLLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEM 302
            .: :.::|:..  ::.:||  |.::|.:...|||.:..::     |..|.|::.....|.     
  Rat   271 EE-EYIQQLCE--DIIQLK--PDVVITEKGISDLAQHYLM-----RANVTAIRRVRKTDN----- 320

  Fly   303 EDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDE 367
            ..||.|.|..::   |...:|.|:|:|                        ....:.:|:::.||
  Rat   321 NRIARACGARIV---SRPEELREDDVG------------------------TGAGLLEIKKIGDE 358

  Fly   368 AFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVR-VAISDGVVPGGGTAY 431
            .||.:...:        .....||.:.|.|:..:||.:....||:...| |.:...:|||||.:.
  Rat   359 YFTFITDCK--------DPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASE 415

  Fly   432 LRCIPVLDELPPTDIMELQVGRE-----IVKDALRLPCYTIARNAGVDPNEVL-----RRVLKGS 486
            :.....|     |:..:...|.|     .|..||.:...|:.:|.|.....:|     :...:..
  Rat   416 MAVAHAL-----TEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENC 475

  Fly   487 GNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQPTK 540
            ..:|.:...|...|:...||.:|..|......:|...|.||...:.:::....|
  Rat   476 ETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKK 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 116/568 (20%)
Cct3NP_954522.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
chap_CCT_gamma 6..529 CDD:274085 116/572 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..545 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.

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