DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and mcp60

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_592894.1 Gene:mcp60 / 2543131 PomBaseID:SPAC12G12.04 Length:582 Species:Schizosaccharomyces pombe


Alignment Length:551 Identity:212/551 - (38%)
Similarity:330/551 - (59%) Gaps:19/551 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GRSGRAGVRTFANDIRFGAEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITV 70
            ||.....|||:|.|::||.:||..|:.||:.||.||:.|||||||||||:|...||:|||||:||
pombe    23 GRFAVPQVRTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTV 87

  Fly    71 ANNVQLGNRRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGI 135
            |.:|.|.::.:::|.:|::...:.||...||||||||:|.|.|..:.:..: .:..|...||.||
pombe    88 ARSVSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNV-AAGCNPMDLRRGI 151

  Fly   136 LEGSRAVCDALGEMSQSVDTIGQVEAVAKVALNGDERLAELIGDIILELGDSGVILLKESHSPFD 200
            ......|.:.|....:.:.|..::..||.::.|||..:.||:...:..:|..|||.:||..:..|
pombe   152 QLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKEGRTISD 216

  Fly   201 EAKIQEGITIASGYYSPFFAK--QSHTLELENCLLLLTLAKIDQVEQILPALELARLKERPLLII 263
            |.::.||:....||.||:|..  :|..:|.||.|:||:..|:..|:.|||:||||..:.|||:||
pombe   217 ELEVTEGMKFDRGYISPYFITDVKSQKVEFENPLILLSEKKVSAVQDILPSLELAAQQRRPLVII 281

  Fly   264 AKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHLLEDA--SSLADLSEE 326
            |::...:.|...:||.|:|::||.|:|||.|||.:...:.|:|..|...:..|.  .|:......
pombe   282 AEDVDGEALAACILNKLRGQLQVVAIKAPGFGDNRRNMLGDLAVLTDSAVFNDEIDVSIEKAQPH 346

  Fly   327 DLGEVMEAVVDAKETHLLQ----PINVNEEQVQCRIQDIRELI-DEAFTDVELDRLKTRLGRLQG 386
            .||......|..::|.:::    .:.||:     |.:.||.:: |...|:.|.::|:.||.:|.|
pombe   347 HLGSCGSVTVTKEDTIIMKGAGDHVKVND-----RCEQIRGVMADPNLTEYEKEKLQERLAKLSG 406

  Fly   387 HLATIFVGGTSELEVSERKDRFNDALHAVRVAISDGVVPGGGTAYLRCIPVLDELPPTDIMELQV 451
            .:|.|.|||:||:||:|:|||..|||:||:.|:|:||:||.||::::....|.:: ||:..:.::
pombe   407 GIAVIKVGGSSEVEVNEKKDRIVDALNAVKAAVSEGVLPGAGTSFVKASLRLGDI-PTNNFDQKL 470

  Fly   452 GREIVKDALRLPCYTIARNAGVDPNEVLRRVLKGSG---NYGYDAAAGEFGDLVVRGIVDPTKVL 513
            |.|||:.|:..|..||..|||::.|.::.::.:..|   |.|||.|...|.||...|::||.||:
pombe   471 GVEIVRKAITRPAQTILENAGLEGNLIVGKLKELYGKEFNIGYDIAKDRFVDLNEIGVLDPLKVV 535

  Fly   514 QSAMTSAAGIASLLATTEVLITKQPTKPKIP 544
            ::.:..|:|:|||:.|||..|...|.:.|.|
pombe   536 RTGLVDASGVASLMGTTECAIVDAPEESKAP 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 210/544 (39%)
GroEL 18..536 CDD:239460 203/529 (38%)
mcp60NP_592894.1 PTZ00114 29..564 CDD:185455 208/541 (38%)
GroEL 35..558 CDD:239460 203/529 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45633
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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