DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp60D and cct3

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_775357.1 Gene:cct3 / 192327 ZFINID:ZDB-GENE-020419-5 Length:543 Species:Danio rerio


Alignment Length:588 Identity:124/588 - (21%)
Similarity:217/588 - (36%) Gaps:163/588 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 MQGVNVLANAVATTLGPKGRNVLIEQLLISPR----ITKDGITVANNVQLGNRRQDMGVQLLRQA 91
            :.....:|:.:.|.|||:.    :.::|:.|.    :|.||..:...:|:    |....:.:.:.
Zfish    26 ISAAKTIADIIRTCLGPRA----MMKMLLDPMGGIVMTNDGNAILREIQV----QHPAAKSMIEI 82

  Fly    92 TNNTNNKVGDGTTTATILA---RGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGEMSQSV 153
            :...:.:||||||:..|||   ..:|.|.:.......|.:...|:.:.:    :.:.|.::|..|
Zfish    83 SRTQDEEVGDGTTSVIILAGEMLSVAEQFLEQQMHPTVVIGAYRQALDD----MLNILKDISTPV 143

  Fly   154 DTIGQ---------------------------VEAVAKVAL--NGDERL-------AELIGDIIL 182
            |...:                           ::||..|.|  ||.|.:       .|.:...|:
Zfish   144 DVSNRDMMLKIINSAINTKALSRWSTLACNIALDAVRTVELDENGREEIDIKKYAKVEKVPGGII 208

  Fly   183 ELGDS----GVILLKESHSP-------------------FDEAKIQEGITIASGYYSPFFAKQSH 224
            |  ||    ||::.|:...|                   :.:.:.|..|.||.   ...||:   
Zfish   209 E--DSCVLRGVMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEIAR---EEDFAR--- 265

  Fly   225 TLELENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDLLKILVLNNLQGRVQVCAV 289
            .|::|.          :.|:||..  ::.|||  |.||..:...|||.:..::     :..:.|:
Zfish   266 ILQMEE----------EYVQQICE--DIIRLK--PDLIFTEKGISDLAQHYLM-----KANITAI 311

  Fly   290 KAPSFGDEQCEEMEDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQV 354
            :.....|.     ..||.|.|..:   ||...:|:|.|:|         ..|.|.          
Zfish   312 RRIRKTDN-----NRIARACGARI---ASRTDELTENDVG---------TGTGLF---------- 349

  Fly   355 QCRIQDIRELIDEAFTDV-ELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVR-V 417
                 :::::.||.||.| |....|.         .||.:.|.|:..::|.:....||:...| |
Zfish   350 -----EVKKIGDEYFTFVTECKDPKA---------CTILLRGASKEILAEVERNLQDAMQVCRNV 400

  Fly   418 AISDGVVPGGGTAYLRCIPVLDELPPTDIMELQVGRE-----IVKDALRLPCYTIARNAGVDPNE 477
            .:...::||||...:.....|     |:......|.|     .|..||.:...|:.:|.|.....
Zfish   401 LLDPYLLPGGGAVEMEVSHRL-----TERSRAMTGVEQWPYRAVAQALEVVPRTLIQNCGASAIR 460

  Fly   478 VL-----RRVLKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEVLITKQ 537
            ||     :...:|:.::|.:...|...|:...||.:|..|......:|...|.||...:.:::..
Zfish   461 VLTSLRAKHTQEGNSSWGVNGETGTLADMEQLGIWEPLAVKAQTYKTAVETAILLLRIDDIVSGH 525

  Fly   538 PTK 540
            ..|
Zfish   526 KKK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 124/588 (21%)
GroEL 18..536 CDD:239460 123/582 (21%)
cct3NP_775357.1 chap_CCT_gamma 5..528 CDD:274085 123/586 (21%)
TCP1_gamma 5..524 CDD:239453 123/582 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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