DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and cct-1

DIOPT Version :9

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_495722.1 Gene:cct-1 / 174318 WormBaseID:WBGene00000377 Length:549 Species:Caenorhabditis elegans


Alignment Length:588 Identity:132/588 - (22%)
Similarity:234/588 - (39%) Gaps:138/588 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GVRTFANDIRFGAEARCLLMQGVN---VLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANN 73
            |.||....||         .|.|.   .:||.|.::|||.|.:.::...:....:|.||.|:...
 Worm    13 GKRTTGQGIR---------SQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68

  Fly    74 VQLGNRRQDMGVQLLRQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEG 138
            :::.:....:.|:|.:.    .:.:||||||:..|:|..:..:...:::| ||:...    |:.|
 Worm    69 LEVEHPAGKVLVELAQL----QDEEVGDGTTSVVIVAAELLKRADELVKQ-KVHPTT----IING 124

  Fly   139 SRAVC-DALGEMSQSV----DTIGQVEAV--AKVALN----GDERLAELIGDIILELGD------ 186
            .|..| :|:..:|:::    |:||:...|  ||.:::    |.:  |:..|:::::..:      
 Worm   125 YRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPD--ADFFGELVVDAAEAVRVEN 187

  Fly   187 --------SGVILLKESHSPFDEAKIQEG----ITIASGYYSPFFAKQSHTLELEN----CL-LL 234
                    :.|.:||.......|:.:.:|    .|:||         |:..|.::|    || ..
 Worm   188 NGKVTYPINAVNVLKAHGKSARESVLVKGYALNCTVAS---------QAMPLRVQNAKIACLDFS 243

  Fly   235 LTLAK----IDQVEQILPALELARLKERPLLIIAKNFGSDLLK-----ILVLNNLQGRVQVCAVK 290
            |..||    |..|.:....||..|.:|   ..|.|.....:||     :|....:........|:
 Worm   244 LMKAKMHLGISVVVEDPAKLEAIRREE---FDITKRRIDKILKAGANVVLTTGGIDDLCLKQFVE 305

  Fly   291 APSFGDEQCE--EMEDIAFATGGHLLEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQ 353
            :.:....:|:  :::.||.|||..|   ..|||.|..:          :|.:..||...:     
 Worm   306 SGAMAVRRCKKSDLKRIAKATGATL---TVSLATLEGD----------EAFDASLLGHAD----- 352

  Fly   354 VQCRIQDIRELIDEAFTDVELDRLKTRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAV-RV 417
                     |::.|..:|.||..:|   |......::|.:.|.:::.:.|.:...:|:|..| ||
 Worm   353 ---------EIVQERISDDELILIK---GPKSRTASSIILRGANDVMLDEMERSVHDSLCVVRRV 405

  Fly   418 AISDGVVPGGGTAYLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAGVDPNEVLRRV 482
            ..|..:|.|||.........|:....|.....|:.......||.:....:|.||..|..:::.::
 Worm   406 LESKKLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTKL 470

  Fly   483 ---------------LKGSGNYGYDAAAGEFGDLVVRGIVDPTKVLQSAMTSAAGIASLLATTEV 532
                           ||.:   |.|...|...|....||::|         :.:.:.||...||.
 Worm   471 RAYHSKAQLIPQLQHLKWA---GLDLEEGTIRDNKEAGILEP---------ALSKVKSLKFATEA 523

  Fly   533 LIT 535
            .||
 Worm   524 AIT 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 131/587 (22%)
GroEL 18..536 CDD:239460 129/582 (22%)
cct-1NP_495722.1 chap_CCT_alpha 9..543 CDD:274081 132/588 (22%)
TCP1_alpha 13..538 CDD:239451 132/588 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0459
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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