DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp60D and Cct4

DIOPT Version :10

Sequence 1:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_033967.1 Gene:Cct4 / 12464 MGIID:104689 Length:539 Species:Mus musculus


Alignment Length:555 Identity:118/555 - (21%)
Similarity:225/555 - (40%) Gaps:88/555 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AEARCLLMQGVNVLANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNRRQDMGVQLL 88
            |:.|...:.....:|:|:.|:|||||.:.:|:.......||.||.|:...:|:.:....|.|:| 
Mouse    31 AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVEL- 94

  Fly    89 RQATNNTNNKVGDGTTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGEMSQSV 153
               :...:.:.|||||:..|:| |........|.|..::..::.|...:......:.|.:||:.|
Mouse    95 ---SKAQDIEAGDGTTSVVIIA-GSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPV 155

  Fly   154 -----DTI---GQVEAVAKVALNGDERLAELIGDIILELGDSG---------VILLKESHSPFDE 201
                 :|:   ......:||.......|:.:..:.::::.|..         :.::|:.....|:
Mouse   156 QLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDD 220

  Fly   202 AKIQEGITIA-----SGYYSPFFAK--------QSHTLELENCLLLLTLAKIDQV--EQILPALE 251
            .::.||:.:.     ||......||        .:...:::|.:::...|::|:|  |:....|.
Mouse   221 CELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILN 285

  Fly   252 LARLKERP---LLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAPSFGDEQCEEMEDIAFATGGHL 313
            |.:..::.   :|:|.|:...|.|..|.|:.| .::::..||                       
Mouse   286 LVKQIKKTGCNVLLIQKSILRDALSDLALHFL-NKMKIMVVK----------------------- 326

  Fly   314 LEDASSLADLSEEDLGEVMEAVVDAKETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLK 378
                    |:..||:..:.:.:......|:        :|....:....||.:|...:......|
Mouse   327 --------DVEREDIEFICKTIGTKPVAHI--------DQFTADMLGSAELAEEVSLNGSGKLFK 375

  Fly   379 TRLGRLQGHLATIFVGGTSELEVSERKDRFNDALHAVRVAISD-GVVPGGGTAYLRCIPVLDELP 442
            .......|...||.|.|:::|.:.|.:...:|||..:|..:.. .::.|||...:.....|.|..
Mouse   376 ITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYS 440

  Fly   443 PT-DIMELQVGREIVKDALRLPCYTIARNAGVDP----NEVLRRVLKGSGNYGYDAAAGEFGDLV 502
            .| ..||....|... ||:.:...|:|.|||::|    .|:..|..:|....|.:...|...:::
Mouse   441 RTLSGMESYCVRAFA-DAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNIL 504

  Fly   503 VRGIVDPTKVLQSAMTSAA-GIASLLATTEVLITK 536
            ...:|.|..|..||:|.|. .:.|:|...:|:.|:
Mouse   505 EEMVVQPLLVSVSALTLATETVRSILKIDDVVNTR 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp60DNP_609656.1 GroEL 18..536 CDD:239460 117/553 (21%)
Cct4NP_033967.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
TCP1_delta 25..538 CDD:239454 117/552 (21%)
Blue background indicates that the domain is not in the aligned region.

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