DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacd2 and hacd3

DIOPT Version :9

Sequence 1:NP_609655.2 Gene:Hacd2 / 34762 FlyBaseID:FBgn0032524 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_002938394.2 Gene:hacd3 / 100379797 XenbaseID:XB-GENE-1006398 Length:362 Species:Xenopus tropicalis


Alignment Length:365 Identity:135/365 - (36%)
Similarity:212/365 - (58%) Gaps:11/365 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLSPFVYWSQTKQTLLLKVDLKDAKGAIADFSPVSVNFSANGHGARGVNAYKFELHFYALIDDEN 67
            :|:|.|:|:|....|.|:|:|.|.:......|...:||.|.||||:|||.|:|.|.|:|.:..: 
 Frog     7 SLTPHVFWAQRHHELYLRVELSDVQNPDITISDNVLNFKAQGHGAKGVNLYEFSLEFFAPVKPK- 70

  Fly    68 ATFV--VSDNKIELQIRKLEPEWWPRLVATPQKPHWLKIDFDRWRTEDDVEVEEKPRDVRQDYEK 130
              |:  .:..::.:.::|.|..|||||:...:||.:|..|.|||..|.|.|:|.:.:: .:...|
 Frog    71 --FIQRSTQRQVAITVKKSEKLWWPRLIKQERKPRFLAPDCDRWLDESDAEMELREKE-EERITK 132

  Fly   131 EYADLQKRELGYIKEKTKKVYMIFYNLAMFVGYLYIMVVMGVLYYRDGVDSIGKTYANVGNAFKF 195
            ...:.:|||..::  ..|:.|:..|||..|:|:.:|.|.|.|..:..|.||...|:.::|:...|
 Frog   133 IRTESRKREDPFL--YLKRGYLFMYNLVQFLGFSWIFVNMTVRLFILGQDSFYDTFNSMGDMMYF 195

  Fly   196 IQLLQYLEVMHPMFGYTKGSPVVPFFQVSGRNFILFLMIDMEPRMYAKPVVFYVFIIWSLVELVR 260
            .|.|..||:::|:.|..|........||.|||||||.::.....|..|.:||::|.:||.:|:.|
 Frog   196 CQTLALLEIINPLIGLVKTGVAPALIQVLGRNFILFFILGQLDEMQTKAIVFFIFYLWSSIEIFR 260

  Fly   261 YPYYLAQLLGREVGLLTWLRYTIWIPLYPMGILCEGIIVLRNIPYIEETKRFTVEMPNPWNITFD 325
            ||:|:...|..|..||||:||||||||||:|.|.|...:::.||...||.||::.:|..:.::|.
 Frog   261 YPFYMLACLDTEWKLLTWIRYTIWIPLYPLGALAEAASIIQAIPIFNETGRFSLRLPLEFTVSFS 325

  Fly   326 MVLFLKIYLMLLIIPGSYLVMSHMAKLRSKKLGKGRAKRQ 365
              :||.:||:||.: |..:.:.|:.|.|.::||..:.|.|
 Frog   326 --VFLVVYLVLLFL-GLGINLRHLLKQRRRRLGSRKRKMQ 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd2NP_609655.2 p23_hB-ind1_like 6..114 CDD:107222 41/109 (38%)
PTPLA 197..357 CDD:282269 65/159 (41%)
hacd3XP_002938394.2 p23_hB-ind1_like 10..117 CDD:107222 41/109 (38%)
PTPLA 197..>325 CDD:367918 54/127 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 140 1.000 Domainoid score I4731
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9494
Inparanoid 1 1.050 257 1.000 Inparanoid score I3065
OMA 1 1.010 - - QHG47944
OrthoDB 1 1.010 - - D1458293at2759
OrthoFinder 1 1.000 - - FOG0008256
OrthoInspector 1 1.000 - - oto105376
Panther 1 1.100 - - LDO PTHR11035
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1673
SonicParanoid 1 1.000 - - X7323
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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