DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tehao and AT5G45220

DIOPT Version :9

Sequence 1:NP_001285901.1 Gene:Tehao / 34761 FlyBaseID:FBgn0026760 Length:795 Species:Drosophila melanogaster
Sequence 2:NP_199335.1 Gene:AT5G45220 / 834558 AraportID:AT5G45220 Length:546 Species:Arabidopsis thaliana


Alignment Length:410 Identity:66/410 - (16%)
Similarity:122/410 - (29%) Gaps:178/410 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 WQCDPRCICWVQRSVGSLIVDCRGT------------SLEELPDL------PRTTLLSTVLKVGN 465
            ::.||..:..:....|....|.|.:            |:.:.|.:      |:...:..|:|   
plant   105 YKLDPSTVRGLSGQFGDAFRDLRESTGLMEKWKEALKSISDRPGIRVDKSSPKAKRIEIVVK--- 166

  Fly   466 NSLTSLPTVSEHSGYANVSGLFLSDNNLTSLGSGDQLPDNLTHLDVRGNQIQSLSDEFLLFLQEP 530
            ..|:.:|:...|:  |:|..|..||..|||.|                               |.
plant   167 KVLSRIPSEGSHN--ASVDPLENSDTRLTSSG-------------------------------EE 198

  Fly   531 NNTMTLSLSGNPITCGCESLSLLFFVRTNPQRVRDIADIVCTKQKKSFQQMEAFELCPSYVLLIS 595
            |.|..:.                       :|:::.      |.|....:|.:         .:.
plant   199 NRTFGIK-----------------------ERLKEF------KDKLDLNKMRS---------QLG 225

  Fly   596 CVVGGLVIVICLLTVFYLMFQQELKIWLYNNNLCLW-----------------------WVSEEE 637
            .|:|      |||.:|:::.|.     .|.:...:.                       :|.||.
plant   226 MVIG------CLLVLFFVLKQS-----AYTSTRLIGEGGAIGAISAIDRIADNVPKIREYVPEEG 279

  Fly   638 LDKDK-TYDAFIS--YSHKDEELIS------KLLPKL--------ESGPHPFRLCLHDRDWLVGD 685
            .:|.: ||..|.:  |..|.|...|      .||.:.        :..|..|::.::.|    ||
plant   280 TEKPRDTYTEFHTGKYGTKPERSSSDVKTNADLLDRTFTDTRMDGKVKPPKFQVFINFR----GD 340

  Fly   686 CIPEQIV------------------------------RTVDDSKRVIIVLSQHFIDSVWARMEFR 720
            .:....|                              :.::||...|:|.|..:.:|.|. :|..
plant   341 QLRNNFVGYLVDALRRSEINVFIDNQEQRGEDLNTLFKRIEDSGIAIVVFSSRYTESKWC-LEEL 404

  Fly   721 IAYQATLQDKRKRIIIILYR 740
            :..:..:.....:::.|.|:
plant   405 VKIKERVHQGLLKVLPIFYK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TehaoNP_001285901.1 leucine-rich repeat 185..207 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..261 CDD:275380
LRR_RI <261..370 CDD:238064
leucine-rich repeat 262..284 CDD:275380
leucine-rich repeat 285..309 CDD:275380
LRR_8 309..368 CDD:290566
leucine-rich repeat 310..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380
leucine-rich repeat 358..381 CDD:275380
leucine-rich repeat 445..482 CDD:275380 7/42 (17%)
LRR_8 459..516 CDD:290566 14/56 (25%)
leucine-rich repeat 483..505 CDD:275380 8/21 (38%)
LRR_4 486..521 CDD:289563 7/34 (21%)
TIR 643..779 CDD:214587 25/144 (17%)
AT5G45220NP_199335.1 TIR 16..171 CDD:279864 11/68 (16%)
TIR 330..468 CDD:214587 15/100 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 44 1.000 Domainoid score I4673
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282372at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.