DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tehao and tlr4bb

DIOPT Version :9

Sequence 1:NP_001285901.1 Gene:Tehao / 34761 FlyBaseID:FBgn0026760 Length:795 Species:Drosophila melanogaster
Sequence 2:NP_997978.2 Gene:tlr4bb / 403132 ZFINID:ZDB-GENE-040219-9 Length:819 Species:Danio rerio


Alignment Length:824 Identity:204/824 - (24%)
Similarity:313/824 - (37%) Gaps:236/824 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 QIIPLPTFCLGLSPQCTCAAEGNVVRFHCPDEYAMLLEVS---------------EPGASLYMSY 72
            |.:.||:|..............|.:.....|..|:|.|:.               ||||   ...
Zfish   160 QSMTLPSFMSTFKDFSLLDLHANNISIIRMDHTAVLREIGRNMTLILSRNPLIHIEPGA---FKD 221

  Fly    73 YASTELQWLPRFNISSLVKIEFDAYIFWPEKFLSDLLKTL-GVQTVKTIIFRDRTLETVVTRDVL 136
            ....||..|..|       |.|:|.        .:..|.| |:...|..:.|.|..|.:      
Zfish   222 VILRELHLLAAF-------ISFNAQ--------KECHKALTGLTVDKLFVGRYRMDEKI------ 265

  Fly   137 NSGNGYMETSQP---ENITTWHFGSVPGLKKFKFFSHVPELQESIFHGFDTLRDLHLSVNVTTLP 198
                   :.|.|   |.:.:.:|..:..::|        |..:|..|.|..:      ||.|.: 
Zfish   266 -------KVSVPDYLEGLCSINFNEIYLVQK--------EWSDSEMHLFRCM------VNATKI- 308

  Fly   199 GNMLSTVNGTLKTLTIESPGIVSFGNPLLRELQQLRNLSLALIHPFHERDKQLQPHFFGSMTNLE 263
                     |:|...:.|                ::::      ||| |.|:|    :.|.|.|.
Zfish   309 ---------TIKKAYMNS----------------MKHI------PFH-RLKEL----YLSDTGLS 337

  Fly   264 EVRLASATSSVNRSM--------FKGTNK---LQLIKMNGNDDLM-ELPGEIFLDQVNLKTLDLS 316
            .|...|...|:.:.:        |.|.:.   ||.:.::||..:: |....:|....|::.|:||
Zfish   338 VVPFISHIPSLEKLVMKSPFPITFTGVSDLPLLQYVDLSGNMLILHECCSILFPRTPNIQYLNLS 402

  Fly   317 CNAIVTLHEDVFKGLGNLTLLDLSKNRLTNL-SSTIFAPLTSLNVL-----RLNKNSLTAMSPSV 375
            .|:.:|...:.|..|..|.:||....:|..: ....|..|.:|..|     |::.|:||      
Zfish   403 QNSEITFVNEPFSALDLLEVLDFHHTKLVIVFYFGFFKHLRNLKYLDISYTRVHFNTLT------ 461

  Fly   376 FQDVVSLNYIEMVNTQFYGATL---LMNYEAVVCTNDEACQYKSAEWQCDPRCICWVQRSVGSLI 437
            |||:.:|..::|....|.|..|   |.|.                                    
Zfish   462 FQDLHNLTVLKMAGNSFSGDKLSYFLQNL------------------------------------ 490

  Fly   438 VDCRGTSLEELPDLPRTTLLSTVLKVGNNSLTSLPTVSEHSGYANVSGLFLSDNNLTSLGSGDQL 502
                 ||||.| |:.:    ..:.||...|.|         |...:..|:||.|.|..|....| 
Zfish   491 -----TSLEVL-DISQ----CGIEKVSMRSFT---------GTQKLRHLYLSRNKLMVLDFLTQ- 535

  Fly   503 PDNLTHLD---VRGNQIQSLSDEFLLFLQEPNNTMTLSLSGNPITCGCESLSLLFFVRTNPQRVR 564
            |: ||||.   :..|.|.::..:.|..|  |.|.....||.|.|.|.|.....:.::......::
Zfish   536 PE-LTHLTSVYIDKNSITTIPLDVLQKL--PMNLSEFDLSSNSIDCSCSQTDFILWIIQKQNILK 597

  Fly   565 DIADIVCTKQKKSFQQMEAF-------ELCP-----SYVLLISCVVGGLVIVICLLTVFYLMFQQ 617
            .:.:|.|    |:|.....|       :.|.     :.||.:.||.  .|:|:.:|.        
Zfish   598 QLENIRC----KTFSANTDFKAIDFDIDYCVHKKRLTIVLSVICVT--FVVVLAILL-------- 648

  Fly   618 ELKIWLYNNNLCLWWVS--EEELDKDKTYDAFISYSHKDEE-LISKLLPKLESGPHPFRLCLHDR 679
             .|.|.| ...|....|  .....::.:||||:.:|..||. ::::|:..||:|..|.:||||.|
Zfish   649 -YKFWFY-VQYCFILFSGYRSPGQQECSYDAFVIFSSYDEAWVMNELMENLENGVPPIQLCLHMR 711

  Fly   680 DWLVGDCIPEQIV-RTVDDSKRVIIVLSQHFIDSVWARMEFRIAYQATLQDKRKRIIIILY---- 739
            |:..|..|...|: ..:..|:::|:|:|||||||.|.|.||.:|....|.::...||||:.    
Zfish   712 DFQAGKSIASNIIDEGIMGSRKIIVVVSQHFIDSSWCRFEFELAQSRFLMERNANIIIIILEDVA 776

  Fly   740 -RELEHMNGIDSELRAYLKLNTYLKWG-DPL----FWSKLYYAM 777
             |:.:.:.|    |..:||.||||||. |||    ||.:|..|:
Zfish   777 ERKTKKVFG----LHKHLKKNTYLKWSRDPLSNMRFWIRLRKAI 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TehaoNP_001285901.1 leucine-rich repeat 185..207 CDD:275380 3/21 (14%)
leucine-rich repeat 209..232 CDD:275380 2/22 (9%)
leucine-rich repeat 233..261 CDD:275380 7/27 (26%)
LRR_RI <261..370 CDD:238064 31/126 (25%)
leucine-rich repeat 262..284 CDD:275380 6/29 (21%)
leucine-rich repeat 285..309 CDD:275380 6/24 (25%)
LRR_8 309..368 CDD:290566 18/64 (28%)
leucine-rich repeat 310..333 CDD:275380 7/22 (32%)
leucine-rich repeat 334..357 CDD:275380 6/23 (26%)
leucine-rich repeat 358..381 CDD:275380 9/27 (33%)
leucine-rich repeat 445..482 CDD:275380 9/36 (25%)
LRR_8 459..516 CDD:290566 18/59 (31%)
leucine-rich repeat 483..505 CDD:275380 8/21 (38%)
LRR_4 486..521 CDD:289563 14/37 (38%)
TIR 643..779 CDD:214587 59/147 (40%)
tlr4bbNP_997978.2 leucine-rich repeat 56..77 CDD:275380
LRR_8 77..133 CDD:290566
leucine-rich repeat 78..101 CDD:275380
leucine-rich repeat 102..125 CDD:275380
leucine-rich repeat 126..148 CDD:275380
leucine-rich repeat 149..173 CDD:275380 4/12 (33%)
leucine-rich repeat 174..200 CDD:275380 5/25 (20%)
leucine-rich repeat 201..222 CDD:275380 4/23 (17%)
LRR_RI <325..531 CDD:238064 63/270 (23%)
leucine-rich repeat 326..369 CDD:275380 10/46 (22%)
leucine-rich repeat 370..395 CDD:275380 6/24 (25%)
LRR_8 394..455 CDD:290566 16/60 (27%)
leucine-rich repeat 396..419 CDD:275380 7/22 (32%)
leucine-rich repeat 420..444 CDD:275380 6/23 (26%)
LRR_8 443..527 CDD:290566 31/144 (22%)
leucine-rich repeat 445..467 CDD:275380 9/27 (33%)
leucine-rich repeat 468..492 CDD:275380 7/64 (11%)
LRR_8 491..576 CDD:290566 32/102 (31%)
leucine-rich repeat 493..516 CDD:275380 9/36 (25%)
leucine-rich repeat 517..540 CDD:275380 9/24 (38%)
leucine-rich repeat 541..565 CDD:275380 6/25 (24%)
TIR 675..816 CDD:214587 58/144 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 96 1.000 Domainoid score I7248
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25481
orthoMCL 1 0.900 - - OOG6_116606
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.820

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