DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tehao and tlr4ba

DIOPT Version :9

Sequence 1:NP_001285901.1 Gene:Tehao / 34761 FlyBaseID:FBgn0026760 Length:795 Species:Drosophila melanogaster
Sequence 2:XP_009305503.1 Gene:tlr4ba / 403131 ZFINID:ZDB-GENE-040219-8 Length:824 Species:Danio rerio


Alignment Length:763 Identity:187/763 - (24%)
Similarity:314/763 - (41%) Gaps:196/763 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LLEVSEPGA------------SLYMSYYA-STELQWLPRFNISSLV--KIEFDAYIFWPEKFLSD 107
            ||.: ||||            |.::|:.| ...|:.|...|:..|:  |...|....:.:..:.|
Zfish   210 LLHI-EPGAFKDVYLRQLDIRSAFVSFSAQKAALKALHGLNVKRLIFGKYREDNGFHFVDNDVLD 273

  Fly   108 LLKTLGVQTVKTIIFRDRTLETVVTRDVLNSGNGYMETSQPENITTWHFGSVPGLKKFKFFSHVP 172
            .|.....|.|...:.........:.|.::|:          ..||      |.|       .::.
Zfish   274 GLCCFNFQEVSYYVLESAKTTIAIFRCMINA----------TRIT------VKG-------GNIY 315

  Fly   173 ELQESIFHGFDTLRDLHLSVN-VTTLPGNMLSTVNGTLKTLTIESPGIVSFGNPLLRELQQLRNL 236
            |::...||   ..::|:|..| :.|||...||.:: ||:.|.|.......|..| ..:|.:|:.:
Zfish   316 EMETVHFH---KTKELYLINNGLGTLPTKQLSHLH-TLEKLEITHNSEPIFAEP-FTDLPKLQYV 375

  Fly   237 SLALIHPFHERDKQLQPHFFGSMTNLEEVRLASATSSVNRSMFKGTNKLQLIKMNGNDDL-MELP 300
            .|:        |.||            :::...:|      :..||.::..:.::.|.:: :::.
Zfish   376 DLS--------DNQL------------KIKHCCST------LLSGTPQINYLNLSLNSEISVDVG 414

  Fly   301 GEIFLDQVNLKTLDLSCNAIVTL-HEDVFKGLGNLTLLDLSKNRLTNLSSTIFAPLTSLNVLRLN 364
            |...||  :|:.||.|...:|.: :..|...|.||..||:|.:.:|..:...|..|:|||||::.
Zfish   415 GFEGLD--SLEILDFSYTRVVRIGYLSVLSNLKNLRYLDVSYSSVTFSNIFCFLGLSSLNVLKMA 477

  Fly   365 KNSLTAMSPSVFQDVVSLNYIEMVNTQFYGATLLMNYEAVVCTNDEACQYKSAEWQCDPRCICWV 429
            .|:        ||..|: .|:      |...|||.:.:...|.                      
Zfish   478 GNN--------FQGNVA-KYV------FNNLTLLEHLDMSFCH---------------------- 505

  Fly   430 QRSVGSLIVDCRGTSLEELPDLPRTTLLSTVLKVGNNSLTSLPTVSEHSGYANVSGLFLSDNNLT 494
                   :|:...:|.:.|..|..       |.|..|.|..:..:: |.....::..::..|::|
Zfish   506 -------LVELHTSSFKYLQRLRH-------LNVKGNYLIKIDFLT-HPNLKQLTSFYVEKNSIT 555

  Fly   495 S--LGSGDQLPDNLTHLDVRGNQIQSLSDEFLLFLQEPNNTMTLSLSGNPITCGCESLSLLFFVR 557
            :  |.....||.||:..|                           ||.|||.|.|.....:.::.
Zfish   556 AIPLHVLKNLPMNLSEFD---------------------------LSFNPIDCSCSQTDFMLWII 593

  Fly   558 TNPQRVRDIADIVC-TKQKKSFQQMEAFELCPSYVLLISCVVGGLVIVICLLTVFYLMFQQELKI 621
            .|.:.::...:|:| |....|..::..|:       :..||....:|::  |.||.::|...|.|
Zfish   594 NNQKVLKQPENILCKTISPNSDFRVTDFD-------IDHCVYKKKLIIV--LPVFCVVFIVVLSI 649

  Fly   622 WLYNNNLCL--WWV--------SEEELDKDKTYDAFISYSHKDEE-LISKLLPKLESGPHPFRLC 675
            .:|.....|  .|:        .::|.    :||||:.:|..||. ::::|:..||:|..|.:||
Zfish   650 LVYRFQFYLRYCWILLRGYRSPGQQEC----SYDAFVIFSSYDEAWVMNELMENLENGVPPIQLC 710

  Fly   676 LHDRDWLVGDCIPEQIV-RTVDDSKRVIIVLSQHFIDSVWARMEFRIAYQATLQDKRKRIIIILY 739
            ||.||:..|..|...|: ..:..|:::|:|:|||||||.|.|.||.:|....|.::...||||:.
Zfish   711 LHMRDFQAGKSIASNIIDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFLMERNANIIIIIL 775

  Fly   740 -----RELEHMNGIDSELRAYLKLNTYLKWG-DPL----FWSKLYYAM 777
                 |:.:.:.|    |..:||.||||||. |||    ||.:|..|:
Zfish   776 EDVAERKTKKILG----LHKHLKKNTYLKWSRDPLSNMRFWIRLRKAI 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TehaoNP_001285901.1 leucine-rich repeat 185..207 CDD:275380 8/22 (36%)
leucine-rich repeat 209..232 CDD:275380 6/22 (27%)
leucine-rich repeat 233..261 CDD:275380 5/27 (19%)
LRR_RI <261..370 CDD:238064 28/110 (25%)
leucine-rich repeat 262..284 CDD:275380 3/21 (14%)
leucine-rich repeat 285..309 CDD:275380 4/24 (17%)
LRR_8 309..368 CDD:290566 21/59 (36%)
leucine-rich repeat 310..333 CDD:275380 7/23 (30%)
leucine-rich repeat 334..357 CDD:275380 7/22 (32%)
leucine-rich repeat 358..381 CDD:275380 7/22 (32%)
leucine-rich repeat 445..482 CDD:275380 7/36 (19%)
LRR_8 459..516 CDD:290566 13/58 (22%)
leucine-rich repeat 483..505 CDD:275380 5/23 (22%)
LRR_4 486..521 CDD:289563 8/36 (22%)
TIR 643..779 CDD:214587 59/147 (40%)
tlr4baXP_009305503.1 leucine-rich repeat 54..76 CDD:275380
LRR_8 77..132 CDD:290566
leucine-rich repeat 77..100 CDD:275380
leucine-rich repeat 101..124 CDD:275380
leucine-rich repeat 125..147 CDD:275380
leucine-rich repeat 148..173 CDD:275380
leucine-rich repeat 175..201 CDD:275380
leucine-rich repeat 325..348 CDD:275380 8/23 (35%)
LRR_RI <326..458 CDD:238064 39/161 (24%)
LRR_8 326..382 CDD:290566 18/65 (28%)
leucine-rich repeat 349..371 CDD:275380 6/22 (27%)
leucine-rich repeat 372..421 CDD:275380 12/76 (16%)
LRR_8 396..454 CDD:290566 15/59 (25%)
leucine-rich repeat 422..446 CDD:275380 7/23 (30%)
LRR_8 445..506 CDD:290566 23/104 (22%)
leucine-rich repeat 447..470 CDD:275380 7/22 (32%)
leucine-rich repeat 471..495 CDD:275380 10/38 (26%)
LRR_8 496..579 CDD:290566 22/146 (15%)
leucine-rich repeat 496..519 CDD:275380 5/51 (10%)
leucine-rich repeat 520..543 CDD:275380 6/30 (20%)
leucine-rich repeat 544..568 CDD:275380 5/23 (22%)
TIR 678..819 CDD:214587 58/144 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 96 1.000 Domainoid score I7248
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm25481
orthoMCL 1 0.900 - - OOG6_116606
Panther 1 1.100 - - O PTHR24365
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.920

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