DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tehao and Cd180

DIOPT Version :9

Sequence 1:NP_001285901.1 Gene:Tehao / 34761 FlyBaseID:FBgn0026760 Length:795 Species:Drosophila melanogaster
Sequence 2:NP_001099875.1 Gene:Cd180 / 294706 RGDID:1308170 Length:662 Species:Rattus norvegicus


Alignment Length:746 Identity:153/746 - (20%)
Similarity:254/746 - (34%) Gaps:223/746 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FALLVLRSATGQIIPLPTFCLGLSPQ-CTCAAEGNVVR-FHCPDEYAMLLEVSEPGA------SL 68
            |.|:.|.||:.|.|       |.|.| ||   |..|.: ::|  |:..|.|:  ||.      ||
  Rat     8 FLLVALFSASCQAI-------GSSDQRCT---EKEVNKTYNC--EHLGLSEI--PGTLPNSTESL 58

  Fly    69 YMSYYASTELQWLPRFNISSLVKIEF----DAYIFW--PEKFLSD-LLKTLGVQTVKTIIFRDRT 126
            ..|:.|...:|   :...|.||.:.|    ...|:|  .:.|.|. .|:|| |.|...:||   .
  Rat    59 EFSFNALPTIQ---KTTFSRLVNLTFLDLTRCQIYWIHEDTFQSQHRLETL-VLTANPLIF---M 116

  Fly   127 LETVVTRDVLNSGNGYMETSQPENITTWHFGSVPGLKKFKFFS-HVPELQESIFHGFDTLRDLHL 190
            .||.:|.........:::|               |:...:|.. |..:..||::.|.:.:..:.|
  Rat   117 AETALTGPKALKHLFFIQT---------------GISSIEFIPVHSQKALESLYLGSNHISSIRL 166

  Fly   191 SVNVTTLPGNMLSTVNGTLKTLTIESPGIVSFGNPLLRELQQLRNLSLAL-------IHPFHERD 248
            ..:..|          ..||.|..::..|.......:..|||..||||.|       |.|...:.
  Rat   167 PKDFPT----------EKLKVLDFQNNAIHHLSKEDVSSLQQATNLSLNLNGNDITGIEPGAFKS 221

  Fly   249 KQLQPHFFGSMTNLEEV--RLASAT---------------SSVNRSMFKGTNKLQLIKMN-GNDD 295
            ...|...||...:|..:  .|.::|               ..::.|||:|..::.:.::| ....
  Rat   222 TVFQSLNFGGTQSLLVIFKGLQNSTIQSLWLGTFEDIDDDEDISSSMFEGLCEMSVERINLQKHH 286

  Fly   296 LMELPGEIFLDQVNLKTLDLSCNAIVTLHEDVFKGLGNLTLLDLSKNRLTNL---SSTIFAPLTS 357
            ...:....|.....|:.|||:...:..|...:. ||..|..|.||.|:..||   |::.|..||.
  Rat   287 FFNITSNTFYCFSGLQELDLTATHLTELPSGIV-GLSKLKKLVLSANKFENLCQISASNFPSLTH 350

  Fly   358 LNV------------------------------------------------LRLNKNSLTAMSPS 374
            |.:                                                |.|:.|....:...
  Rat   351 LYIKGNTKRLELGSGCLETLEHLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLGLRTE 415

  Fly   375 VFQDVVSLNYIEMVNTQFY---GATLLMNYEAVVCTNDEACQYKSAEWQCDPRCICWVQRSVGSL 436
            .|::...|..:::..|:.:   ..:...|...:...|...|...|:....               
  Rat   416 AFKECPQLELLDLAFTRLHVKDAQSPFQNLHLLKVLNLSHCLLGSSNQHL--------------- 465

  Fly   437 IVDCRGTSLEELPDLPRTTLLSTVLKVGN----NSLTSLPTVS------------EHSGYAN--- 482
                    |:.||.|....|.......||    |.|.:|.::.            :|..:.|   
  Rat   466 --------LDGLPALRHLNLQGNRFPNGNIQKTNPLQALGSLEILILSFCDLSSIDHQAFINLKI 522

  Fly   483 VSGLFLSDNNLTSLGSGDQLPDNLTH-----LDVRGNQIQSLSDEFLLFLQEPNNTMTLSLSGNP 542
            ::.:.||.|.|||...     :.|:|     |::..|:|..:....|..|.:..   |::|..||
  Rat   523 MNHVDLSHNRLTSSSI-----EALSHLKGIYLNLASNRISIIPPSLLPVLSQQR---TINLRQNP 579

  Fly   543 ITCGCESLSLLFFVRTNPQRVRDIADIVCTKQKKSFQQMEAFELCPSYV-------LLISCVVGG 600
            :.|.|.::..|.:.:.|.|::.||.|..|..              |..:       :::||.:..
  Rat   580 LDCTCSNIYFLEWYKENMQKLEDIEDTFCAN--------------PPLLRGVKVSDVMLSCSMAA 630

  Fly   601 -----LVIVICLLTVFYLMFQQELKIWLYNN 626
                 |::.:.|..|..:...:....|.|.:
  Rat   631 VGIFFLIVFLLLFAVLLIFAVKRFLRWKYQH 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TehaoNP_001285901.1 leucine-rich repeat 185..207 CDD:275380 2/21 (10%)
leucine-rich repeat 209..232 CDD:275380 5/22 (23%)
leucine-rich repeat 233..261 CDD:275380 10/34 (29%)
LRR_RI <261..370 CDD:238064 31/177 (18%)
leucine-rich repeat 262..284 CDD:275380 7/38 (18%)
leucine-rich repeat 285..309 CDD:275380 2/24 (8%)
LRR_8 309..368 CDD:290566 22/109 (20%)
leucine-rich repeat 310..333 CDD:275380 7/22 (32%)
leucine-rich repeat 334..357 CDD:275380 10/25 (40%)
leucine-rich repeat 358..381 CDD:275380 5/70 (7%)
leucine-rich repeat 445..482 CDD:275380 11/52 (21%)
LRR_8 459..516 CDD:290566 17/80 (21%)
leucine-rich repeat 483..505 CDD:275380 6/21 (29%)
LRR_4 486..521 CDD:289563 11/39 (28%)
TIR 643..779 CDD:214587
Cd180NP_001099875.1 leucine-rich repeat 55..78 CDD:275380 7/25 (28%)
leucine-rich repeat 79..102 CDD:275380 5/22 (23%)
leucine-rich repeat 103..126 CDD:275380 10/26 (38%)
leucine-rich repeat 127..150 CDD:275380 4/37 (11%)
leucine-rich repeat 151..174 CDD:275380 5/32 (16%)
leucine-rich repeat 175..195 CDD:275380 4/19 (21%)
leucine-rich repeat 196..223 CDD:275380 10/26 (38%)
leucine-rich repeat 224..244 CDD:275380 5/19 (26%)
leucine-rich repeat 277..300 CDD:275380 2/22 (9%)
LRR_RI 301..480 CDD:238064 34/202 (17%)
leucine-rich repeat 301..323 CDD:275380 7/22 (32%)
LRR_8 322..383 CDD:290566 12/60 (20%)
leucine-rich repeat 324..347 CDD:275380 9/22 (41%)
leucine-rich repeat 348..372 CDD:275380 3/23 (13%)
LRR_8 372..433 CDD:290566 6/60 (10%)
leucine-rich repeat 373..398 CDD:275380 0/24 (0%)
leucine-rich repeat 399..422 CDD:275380 4/22 (18%)
LRR_8 421..482 CDD:290566 11/83 (13%)
leucine-rich repeat 423..447 CDD:275380 3/23 (13%)
leucine-rich repeat 448..471 CDD:275380 5/45 (11%)
leucine-rich repeat 472..498 CDD:275380 7/25 (28%)
LRR_8 498..556 CDD:290566 12/62 (19%)
leucine-rich repeat 499..522 CDD:275380 2/22 (9%)
leucine-rich repeat 523..546 CDD:275380 8/27 (30%)
TPKR_C2 578..627 CDD:301599 13/62 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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