DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7110 and dnajc17

DIOPT Version :10

Sequence 1:NP_609652.3 Gene:CG7110 / 34757 FlyBaseID:FBgn0032521 Length:825 Species:Drosophila melanogaster
Sequence 2:NP_001017233.1 Gene:dnajc17 / 549987 XenbaseID:XB-GENE-5811332 Length:310 Species:Xenopus tropicalis


Alignment Length:179 Identity:51/179 - (28%)
Similarity:82/179 - (45%) Gaps:53/179 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 AEQVRKTTQPTAVTAPNRSSQSSTSTSNHSTTDKTDLELIVNSNPNYVPPKIRPGTTRHKLLQDL 264
            |::::|..:..|:|.                            :|:..|...|.....|:|.|.|
 Frog    27 AKEIKKAYRQKALTC----------------------------HPDKNPDNPRAAELFHQLSQAL 63

  Fly   265 GHVELSNIVTGDGIMER---NLRSAELETARKKDYQRDLMQQIDEKRRSIEL-LREKERRQEEAL 325
                  .::| ||..:.   |||.|: |.|.|:      .|::||||:.::| |..:||..:..:
 Frog    64 ------EVLT-DGAAKAAYDNLRKAK-EAAAKR------TQKLDEKRKKVKLDLEAREREAQAVV 114

  Fly   326 TRRLEAQLKTIQLEEQLEKE--RVRAEKARIDSEQNRLMREQLLAKLEQ 372
            |...||     |:.:.||:|  |:|.|.:|...||.||:|||:.|::||
 Frog   115 TEEDEA-----QVAQTLEQEIIRLREEGSRQLEEQQRLVREQIKAEMEQ 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7110NP_609652.3 Smc <280..>387 CDD:440809 37/99 (37%)
dnajc17NP_001017233.1 DnaJ 14..164 CDD:440252 51/179 (28%)
DnaJ 14..76 CDD:395170 14/83 (17%)
RRM_DNAJC17 188..250 CDD:409863
Blue background indicates that the domain is not in the aligned region.

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