DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10859 and dync1i2b

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_009300385.1 Gene:dync1i2b / 561612 ZFINID:ZDB-GENE-090121-1 Length:645 Species:Danio rerio


Alignment Length:482 Identity:97/482 - (20%)
Similarity:174/482 - (36%) Gaps:91/482 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EVNQLMHAAMDISSANNAVNIYE-------DFFVDLP-EDL---------GRGISMKIAARGTHV 159
            |..|::|:...::..:::..|.|       |.|.|.. .||         |..:|:      ...
Zfish   219 EKQQILHSEEFVTFFDHSSRIMERALSEQVDVFFDYSGRDLQDKEGESQAGAKLSL------NRQ 277

  Fly   160 FHDLWIPSRRLMTC-EWLNNDPNQFLLFYSNRMSLTPDYTKQLNTLPDFGNDNPH----AFYIWN 219
            |.|......|::|| :|                  :|.|.:.|........:.||    ...:||
Zfish   278 FADERWSKHRVVTCLDW------------------SPQYPELLVASYCSNEEAPHEPDGVALVWN 324

  Fly   220 LD-DATRPAAHYDSRRVVRVAKVCLRDESYMVGGLQEGQVGFW-LTENQGGPKSMCPLEA-CHRE 281
            :. ..|.|...:..:..|..|.......:.:|||...||:..| ...|:..|....||.| .|..
Zfish   325 MKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSASAHTH 389

  Fly   282 ATTAICWVHSKLNTEFYSGSLDGSIKYWDTRDLLMPVHEVLAEPDPQTVQNRQDAHGVTFLEFEY 346
            ....:..|.::......|.|.||.:..| :.|:|....:.|     :.|..:..:..||.:.|..
Zfish   390 PVYCVNVVGTQNAHNLISISTDGKMCSW-SLDMLSTPQDSL-----ELVFKQSKSVAVTSMSFPL 448

  Fly   347 TIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGPIR---C-VMRNPFFVKNFLVVG--DW 405
            .....|:..::.|.::...|.|:  :..|...::...|||.   | ....|....:..|..  ||
Zfish   449 GDVNNFVVGSEDGSVYTACRHGS--KAGISEMFEGHHGPITGLDCHTAAGPVDFSHLFVTSSFDW 511

  Fly   406 RVRIWSEEVKNCPSTFYFRRPNQLLSGAWSTGRCSLFCIGDNMGNLEFWDLLMSHKRPI--LTIK 468
            .|::||.: .|.|...:....:.:....||....:||...|.:|:|:.|:|....:.|.  :|::
Zfish   512 TVKLWSTK-NNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNETEVPTASVTVE 575

  Fly   469 YKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKEKSLMMSMFEREIQRCKLLEAREE 533
            ...|:..:.:...|..:.|..:.|...:..:.|.:.                       :..::|
Zfish   576 GNPALNRVRWAHSGREVAVGDSEGQLHIYDVGEQIS-----------------------VPRQDE 617

  Fly   534 EIKLKKRLTTIFLEEERKSREKLEAKK 560
            ..:..:.||.|  .|.|:..|:|.|::
Zfish   618 WTRFVRTLTEI--NENREDVEELAAQR 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 17/66 (26%)
WD40 261..>512 CDD:225201 54/260 (21%)
WD40 279..492 CDD:295369 46/220 (21%)
WD40 repeat 284..332 CDD:293791 10/47 (21%)
WD40 repeat 386..422 CDD:293791 11/41 (27%)
WD40 repeat 429..454 CDD:293791 7/24 (29%)
dync1i2bXP_009300385.1 Dynein_IC2 145..173 CDD:288403
Spore_coat_CotO 153..>256 CDD:290858 8/36 (22%)
WD40 283..605 CDD:295369 73/348 (21%)
WD40 repeat 289..338 CDD:293791 12/66 (18%)
WD40 repeat 343..382 CDD:293791 9/38 (24%)
WD40 362..>606 CDD:225201 55/252 (22%)
WD40 repeat 391..434 CDD:293791 10/48 (21%)
WD40 repeat 442..490 CDD:293791 10/49 (20%)
WD40 repeat 497..528 CDD:293791 9/31 (29%)
WD40 repeat 534..575 CDD:293791 11/40 (28%)
WD40 repeat 580..606 CDD:293791 3/25 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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