DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10859 and dnai1.2

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001074027.1 Gene:dnai1.2 / 555705 ZFINID:ZDB-GENE-070112-1302 Length:660 Species:Danio rerio


Alignment Length:490 Identity:108/490 - (22%)
Similarity:190/490 - (38%) Gaps:104/490 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RYRKKVERDDSWGIEVNQLMHAAMDISSANNAVNIYED------FFVDLPE-------------- 142
            |.:||:.:.::...:::||...|..|....|. ||:::      :|.|..:              
Zfish   231 RSKKKMIQAEAQSDDISQLAKPAEIIERMVNQ-NIFDEVAQDFMYFEDAADEFRGEKGTLLPLWK 294

  Fly   143 ---DLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPNQFLLFYSNRMSLTPDYTKQLNTL 204
               |..:|:|: .|....|::.||:...  |.:.|:...: ...||||:.:   .|.:       
Zfish   295 FQYDKAKGLSV-TALCWNHIYSDLFAVG--LGSYEFTQQE-RGMLLFYTLK---NPSF------- 345

  Fly   205 PDFGNDNPHAFYIWNLDDATRPAAHYDSRRVVRVAKVCLRDE-SYMVG-GLQEGQVGFW-LTENQ 266
            |:|         |:|.|..              |..|.:.:: ||:|. ||.:|.|..: |.:..
Zfish   346 PEF---------IFNTDSG--------------VMCVDIHEQLSYLVAVGLYDGCVSVYDLRKKS 387

  Fly   267 GGPK-SMCPLEACHREATTAICWVHSKL--NTEFYSGSLDGSIKYWDT-------RDL--LMPVH 319
            ..|. :.......|..|...:.|....|  |..|:|.|.||.:..|..       .|:  |.||.
Zfish   388 DQPMYNSIASSGKHTGAVWQVKWQKDDLDSNHNFFSVSTDGRVVSWTLVKHEIVFTDIIKLPPVD 452

  Fly   320 EVLAEPDPQTVQNRQDAHGVTFLEFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAG 384
            :|     |..::|.....| |.|:|.......|:..|:.|.:..|::..::   ..:..|.....
Zfish   453 KV-----PDDLKNVVATAG-TSLDFHKQKDHHFLVGTEAGKIHKGSKYYSS---KFLEMYDAHFM 508

  Fly   385 PIRCVMRNPFFVKNFLVVG-DWRVRIWSEEVKNCPSTFYFRRPNQLLSGAWSTGRCSLFCIGDNM 448
            .:.||..|||....|:..| ||.|:||...: |.| .|.|...:.:...|||....::|......
Zfish   509 TVSCVRWNPFHPNVFISCGWDWMVKIWDHTI-NSP-VFTFELKSSVTDVAWSPHSSTVFAAVTAD 571

  Fly   449 GNLEFWDLLMSHKRPIL---TIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKE 510
            |.:..:||.::....:.   .:..|..:.|:.|.|...::.|....|..:.|:|...:|....::
Zfish   572 GKVHVFDLSINKYEALCQQKVVSKKTRLLHIEFNPVHPIIIVGDDRGRVISLKLSPNLRKKPKEK 636

  Fly   511 KSLMMSMFEREIQRCKLLEAREEEI-KLKKRLTTI 544
            |..            :|.:..|.|| |:::.|:::
Zfish   637 KGQ------------ELPKGPEVEIAKMEQLLSSL 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 19/70 (27%)
WD40 261..>512 CDD:225201 61/267 (23%)
WD40 279..492 CDD:295369 55/227 (24%)
WD40 repeat 284..332 CDD:293791 15/58 (26%)
WD40 repeat 386..422 CDD:293791 14/36 (39%)
WD40 repeat 429..454 CDD:293791 5/24 (21%)
dnai1.2NP_001074027.1 WD40 <296..650 CDD:225201 93/413 (23%)
WD40 354..620 CDD:295369 67/290 (23%)
WD40 repeat 357..397 CDD:293791 10/39 (26%)
WD40 repeat 405..485 CDD:293791 22/85 (26%)
WD40 repeat 511..547 CDD:293791 15/37 (41%)
WD40 repeat 552..591 CDD:293791 7/38 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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