DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and LOC4576277

DIOPT Version :10

Sequence 1:NP_609651.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:XP_001237748.2 Gene:LOC4576277 / 4576277 VectorBaseID:AGAMI1_000491 Length:693 Species:Anopheles gambiae


Alignment Length:593 Identity:114/593 - (19%)
Similarity:198/593 - (33%) Gaps:184/593 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TDRNEMILSVQPSGRLRLKYILRNPINERTQLSEQ------------YAASSVLTHNVTLDSHGL 76
            |:.::::|...||      :::.....|..::.||            .|.:...|.::...|..:
Mosquito   132 TETDDIVLFESPS------HVVSLDAEEAARVQEQNRRFETRPKARRTADAEAQTRDLPCKSRSV 190

  Fly    77 N--------------HYE--GGWN-----VKEVNIMDEESTMR---YRKKVERDDSWGIEVNQLM 117
            |              :|:  ..:|     .||:|:.|..|.:.   |.::...|....:..|...
Mosquito   191 NTECIHRQDVASFVSNYDMYDTYNDLERHTKEINVADSASKLEITTYSREGMEDIDERLNRNANF 255

  Fly   118 HAAMDISSANNAVNIYEDFFVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPNQ 182
            |.:..|.....|.|:|.:..:.                    |.:::.|            ||.:
Mosquito   256 HLSSMILQRLLAGNVYREQQIR--------------------FRNMYPP------------DPCR 288

  Fly   183 FLLFYSNRMSLTPDYTKQLNTL----------PDFG---------------NDNPHAF-YIWNLD 221
            ..:.|..|:.:...| :.:.||          |..|               :|....| |:||:.
Mosquito   289 EDIRYLYRLDVLWTY-RTVETLGKPVASASWCPANGDIVALAYGIYGHTGSDDRGCGFVYVWNIK 352

  Fly   222 DATRPAAHYDSRRVVRVAKVCLRDESYMVGGLQEGQVGFW-LTENQGGPKSMCPLEACHREATTA 285
            :...|...|.....|.......|....:..||.:|:|... :|:.     :..||...:|:....
Mosquito   353 NPVNPERRYRFDCPVTCVAFSRRTPQLLAVGLYDGRVQVRDITDT-----TQTPLAVSNRDRFPV 412

  Fly   286 ------ICWVH--SKLNTEFYSGSLDGSI-KYWDT-RDLLMP-----VHEVLAEPDPQT------ 329
                  :.||.  ::...|..:.|.:|.: ||..| ...|:|     :..|...|:.||      
Mosquito   413 YQPIWDLKWVEFDNEGKDEVIAVSQNGWVMKYTLTIGQYLLPYPLLRLDRVEGTPEGQTSTGTSA 477

  Fly   330 ------VQNRQDAHGVTFLEFEYTI-PVRFIFCTDMGYLFVGNRKGTTPQDTI------VAAYQL 381
                  |:.:.|.|.....   .|| ||:    .|..|  :|..:|.....:|      :...|:
Mosquito   478 PADQQPVRVQSDLHPQALC---VTIHPVQ----KDKYY--IGTDEGAVHWCSINDPFQHLGVLQM 533

  Fly   382 FAGPIRCVMRNPFFVKNFLVV-GDWRVRIWSEEVKNCPSTFYFRRPNQLL----------SGAWS 435
            .:..|.|:..:|:..:.||.. |||.:|||.||:           |..::          :..||
Mosquito   534 HSRGIFCLEYSPWSPRIFLTCSGDWSIRIWIEEL-----------PEPIVTLCTGFAPIQAAYWS 587

  Fly   436 TGRCSLFCIGDNMGNLEFWDLLMSHKRPI-------LTIKYKYAVTHLVFKPDGTMLTVSLANGD 493
            ....::.......| ::.|||.....:|.       ||.    |:|.:.|...|..|.|..|.|.
Mosquito   588 PTNSTVIASVTRSG-VQLWDLKRRSSKPASETTLGSLTT----ALTVVRFTNCGRCLLVGDAEGK 647

  Fly   494 CLMLRLEE 501
            ..:..||:
Mosquito   648 AHVCALED 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_609651.1 WD40 <245..310 CDD:475233 15/74 (20%)
WD40 279..492 CDD:475233 58/264 (22%)
WD40 repeat 284..332 CDD:293791 15/74 (20%)
WD40 repeat 386..422 CDD:293791 13/36 (36%)
WD40 repeat 429..454 CDD:293791 3/34 (9%)
LOC4576277XP_001237748.2 WD40 <294..650 CDD:441893 81/386 (21%)
WD40 repeat 368..406 CDD:293791 8/42 (19%)
WD40 repeat 416..489 CDD:293791 15/72 (21%)
WD40 repeat 497..533 CDD:293791 9/41 (22%)
WD40 repeat 538..574 CDD:293791 14/46 (30%)
WD40 repeat 581..621 CDD:293791 7/40 (18%)
WD40 repeat 627..664 CDD:293791 9/29 (31%)

Return to query results.
Submit another query.