DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10859 and sw

DIOPT Version :10

Sequence 1:NP_609651.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_477075.2 Gene:sw / 44160 FlyBaseID:FBgn0003654 Length:663 Species:Drosophila melanogaster


Alignment Length:477 Identity:100/477 - (20%)
Similarity:180/477 - (37%) Gaps:81/477 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 KEVNIMDEESTMRYRKKV----ERDDSWGIEVNQLMHAAMDISSANNAVNIYEDFFVDLPEDLGR 146
            ||||.:.||     :|::    |....:.:...:::..|:   |.|  |:||.|:       :|.
  Fly   237 KEVNELSEE-----QKQMIILSENFQRFVVRAGRVIERAL---SEN--VDIYTDY-------IGG 284

  Fly   147 GISMKIAARGTH-------VFHD-LWIPSRRLMTCEWLNNDPNQFLLFYSNRMSLTPDYTKQLNT 203
            |.|.:.....:|       ||:| .|..:|.:.:.:|..:.|...:..|.|.             
  Fly   285 GDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN------------- 336

  Fly   204 LPDFGNDNPHAFYIWNL---DDATRPAAHYDSRRVVRVAKVCLR--DESYMVGGLQEGQVGFWLT 263
             .:..|:......:||.   ........|..|    .|...|..  :.:.::||...||:..|..
  Fly   337 -EESPNEPDGVVMVWNTKFKKSTPEDVFHCQS----AVMSTCFAKFNPNLILGGTYSGQIVLWDN 396

  Fly   264 ENQ-GGPKSMCPLE-ACHREATTAICWVHSKLNTEFYSGSLDGSIKYWDTRDLLMPVHEVLAEP- 325
            ..| ..|....||. |.|......:..|.::......|.|.||.:..|..        ::|::| 
  Fly   397 RVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSL--------DMLSQPQ 453

  Fly   326 DPQTVQNRQD-AHGVTFLEFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGPIRCV 389
            |...:|.||. |..:|.:.|........:..::.||::..:|.|.  :..:...|:...|||..:
  Fly   454 DTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGL--RSGVNEVYERHLGPITGI 516

  Fly   390 -----MRNPFFVKNFLVVG-DWRVRIWSEEVKNCPSTFYFR-RPNQLLSGAWSTGRCSLFCIGDN 447
                 ..:|.|...||... ||.:::||  :|:....:.|. ..:.::..|||....:||...|.
  Fly   517 STHYNQLSPDFGHLFLTSSIDWTIKLWS--LKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDG 579

  Fly   448 MGNLEFWDLLMSHKRPI--LTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKE 510
            .|.|:.|:|....:.|.  :.:....|:..:.:.|.|..:.:....|...:..:.|.:...:..|
  Fly   580 SGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDE 644

  Fly   511 KSLMMSMFEREIQRCKLLEARE 532
                .|.|...:...|:.::.|
  Fly   645 ----WSRFNTHLSEIKMNQSDE 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_609651.1 WD40 <245..310 CDD:475233 16/66 (24%)
WD40 279..492 CDD:475233 48/223 (22%)
WD40 repeat 284..332 CDD:293791 9/48 (19%)
WD40 repeat 386..422 CDD:293791 10/41 (24%)
WD40 repeat 429..454 CDD:293791 8/24 (33%)
swNP_477075.2 Dynein_IC2 105..135 CDD:463291
WD40 316..632 CDD:475233 70/345 (20%)
WD40 repeat 316..365 CDD:293791 7/62 (11%)
WD40 repeat 371..409 CDD:293791 8/37 (22%)
WD40 repeat 418..457 CDD:293791 9/46 (20%)
WD40 repeat 469..555 CDD:293791 19/89 (21%)
WD40 repeat 561..599 CDD:293791 11/37 (30%)
WD40 repeat 607..633 CDD:293791 3/25 (12%)
Blue background indicates that the domain is not in the aligned region.

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