DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and CG9313

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001286657.1 Gene:CG9313 / 37374 FlyBaseID:FBgn0034566 Length:740 Species:Drosophila melanogaster


Alignment Length:535 Identity:116/535 - (21%)
Similarity:180/535 - (33%) Gaps:133/535 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VTLDSHGLNHYEGGWNVKEVNIMDEESTMRYRKKVERDDS-------------WGI---EVNQLM 117
            |..||:..|..|.    ::.....||.....|:|..||.|             |.|   .:||  
  Fly   261 VIYDSYMENFAES----QKDGTKKEERKRGKREKKFRDKSAIAEQLNKKYLKCWQILERMINQ-- 319

  Fly   118 HAAMDISSANNAVNIYEDFFVDL-----PEDLGRGISMKIAARGTHVFHDLW----IPSRRLMTC 173
                         |||:|...|.     |.|..|        .|......||    ..::::...
  Fly   320 -------------NIYDDIAHDYRYWEDPADEFR--------EGEGNLLPLWKFQYDKTKKMNVT 363

  Fly   174 EWLNNDPNQFLLF---YSNRMSLTPDYTKQLNT--LPDFGNDNPHAF--YIWNLDDATRPAAHYD 231
            :.|.| |:.:.||   :.:.     |:.||.|.  |..|...|| :|  ||...|..        
  Fly   364 DILFN-PSYYDLFAVCFGSH-----DFMKQTNEGYLCLFTVKNP-SFPDYIIQTDCG-------- 413

  Fly   232 SRRVVRVAKVCLRDESY---MVGGLQEGQVGFW-LTENQGGPKSMCPLEAC-HREATTAICWVHS 291
                   ...|....:|   .|.||.:|.|..: |.|:...|..:.....| |.|....|.|...
  Fly   414 -------VMCCDIHPTYPFLAVIGLYDGNVAVYNLREDCKEPLYVSRGVNCKHGECVWQIKWGLD 471

  Fly   292 KLNTE--FYSGSLDGSI--------KYWDTRDLLMPVHEVLAE-PDPQTVQNRQDAHGVTFLEFE 345
            ..:.|  |:|.|.||.:        |.|.|..:.:.....|.: ||...|..:.....:.|...:
  Fly   472 MADGEVNFFSVSSDGRVFNWILMQNKLWVTTIITLYRENGLVDGPDGTKVTLKSGGSCMVFHPVD 536

  Fly   346 YTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGPIRCVMRNPFFVKNFLVVG-DWRVRI 409
            ..|   |:..|:.||::   :..|......:..|......:..:..|.|....|:..| ||.|::
  Fly   537 NKI---FLVGTECGYIY---KCSTAFSSKYLMTYYAHNMSVYRIDFNRFNSNIFVSCGADWMVKV 595

  Fly   410 WSEEVKNCPSTFYFRRPNQL----LSGA-----WSTGRCSLFCIGDNMGNLEFWDLLMSHKRPI- 464
            |.:           .||:.|    |..|     |:....::|......|.:..:||.::..:.| 
  Fly   596 WED-----------MRPDPLFIFDLGAAVGDVKWAPYSSTVFAAVTTEGKVHVFDLNVNKYKAIC 649

  Fly   465 ---LTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKEKSLMMSMFEREIQRCK 526
               :..|.|..:|.|.|......:.|....|....|:|...:|......|. .:.:.:..:|..|
  Fly   650 IQAVVPKRKNKLTRLSFNEKLAFIVVGDEKGVTTSLKLSPNLRMMVKPPKK-QLYLDQNTLQIGK 713

  Fly   527 LLEAREEEIKLKKRL 541
            |    |:.:.|.:.|
  Fly   714 L----EKLLSLVREL 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 21/79 (27%)
WD40 261..>512 CDD:225201 58/277 (21%)
WD40 279..492 CDD:295369 50/237 (21%)
WD40 repeat 284..332 CDD:293791 15/58 (26%)
WD40 repeat 386..422 CDD:293791 8/36 (22%)
WD40 repeat 429..454 CDD:293791 6/33 (18%)
CG9313NP_001286657.1 WD40 <353..706 CDD:225201 83/392 (21%)
WD40 repeat 362..412 CDD:293791 16/56 (29%)
WD40 413..640 CDD:295369 52/258 (20%)
WD40 repeat 415..454 CDD:293791 10/38 (26%)
WD40 repeat 463..505 CDD:293791 11/41 (27%)
WD40 repeat 513..557 CDD:293791 10/49 (20%)
WD40 repeat 571..608 CDD:293791 11/47 (23%)
WD40 repeat 613..654 CDD:293791 6/40 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435245
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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