DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10859 and Dnai2

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001007727.1 Gene:Dnai2 / 360654 RGDID:1359602 Length:619 Species:Rattus norvegicus


Alignment Length:631 Identity:186/631 - (29%)
Similarity:290/631 - (45%) Gaps:77/631 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FILSRERRRFGRQCLFTDRN-EMILSVQPSGRLRLKYILRNPINERTQLSEQYAASSVLTHNVTL 71
            ::..::|..||:||.|:||. |:.:.:.|:..|...|:.|||::...|.|...:.....|....:
  Rat     5 YVYVKKRSEFGKQCNFSDRQAELNIDISPNPELAALYVERNPVDTGIQCSASMSEHEANTERFEM 69

  Fly    72 DSHGLNHYEGGWNVKEVNIMDEESTMRYRKKVERDDSWGIEVNQLMHAAMDISSANNAVNIYEDF 136
            ::.|:||.|||| .|:||..:.|.|:|:|||||:|:::...|.||..........|||::|||::
  Rat    70 ENCGVNHVEGGW-PKDVNPQELEQTIRFRKKVEKDENYINAVMQLGSIMEHCIKQNNAIDIYEEY 133

  Fly   137 FVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPN---------QFLLFYSNRMS 192
            |.|  |:.........:|:..:||.|   |.....|...|:..|:         ..|.|..:.|.
  Rat   134 FDD--EEAVEVTEEAPSAKTINVFRD---PQEIKRTATHLSWHPDGNKKLAVAYSCLQFQRSPMG 193

  Fly   193 LTPDYTKQLNTLPDFGNDNPHAFYIWNLDDATRPAAHYDSRRVVRVAKVCLRDESYMVGGLQEGQ 257
            ::                  |..|||:|::..||.........:...:...:|...::||...||
  Rat   194 MS------------------HDSYIWDLENPNRPEIALKPSSPLITLEYNPKDSHVLLGGCYNGQ 240

  Fly   258 VGFWLTENQGGPKSMCPLEACHREATTAICWVHSKLNTEFYSGSLDGSIKYWDTRDLLMPVHEVL 322
            :..|.|........:..:|..||:......|:.||..||.:|.|.||.:.:||.|.:..|...|:
  Rat   241 IACWDTRKGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIRKISEPTEVVI 305

  Fly   323 AEPDPQTVQNRQDAHGVTFLEFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGPIR 387
            .  |....:..::|.|...||||.|:|.:|:..|:.|.:...|||..||.:.||..:....|||.
  Rat   306 M--DITRKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTPAEKIVCTFSGHHGPIY 368

  Fly   388 CVMRNPFFVKNFLVVGDWRVRIWSEEVKNCPSTFYFRRPNQ--LLSGAWSTGRCSLFCIGDNMGN 450
            .:.||||:.||||.||||..||||||.:.  |:..:.|.:.  |..||||..|.::|......|.
  Rat   369 ALQRNPFYPKNFLTVGDWAARIWSEESRE--SSIMWTRYHMAYLSDGAWSPVRPAVFFTTKMDGT 431

  Fly   451 LEFWDLLMSHKRPILTIKY-KYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKEKSLM 514
            |:.|||:.....|.|::|. ...:..|..:..|.::......|...:|.:...:.:....|:::.
  Rat   432 LDIWDLVFKQCDPALSLKVCDDPLFCLRVQDTGCLIACGSELGTTTLLEVSSSLSTLQRNERNIA 496

  Fly   515 MSMFEREIQRCKLLEAREEEIKLKKR------------------------------LTTIFLEEE 549
            .|:||||.:|.|:||||..|::||::                              ...||.|.:
  Rat   497 SSIFERETRREKILEARHREMRLKEKGKAEGRDDDQKEEETALDLDELVNKAEEEFFEVIFAELK 561

  Fly   550 RKSREKLEAKKKKGQAKKEMEPKVEDEATIFLRMIESDSEFSKALL 595
            ||..|.|:.|.|..:|..|:|.  |||    |..|..:.|.|..::
  Rat   562 RKEAEALKKKPKPKKASIEVEG--EDE----LEDIAGEEEESGIIM 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 19/64 (30%)
WD40 261..>512 CDD:225201 81/253 (32%)
WD40 279..492 CDD:295369 75/215 (35%)
WD40 repeat 284..332 CDD:293791 15/47 (32%)
WD40 repeat 386..422 CDD:293791 20/35 (57%)
WD40 repeat 429..454 CDD:293791 9/24 (38%)
Dnai2NP_001007727.1 WD40 repeat 165..212 CDD:293791 12/64 (19%)
WD40 <166..489 CDD:225201 97/344 (28%)
WD40 166..472 CDD:295369 95/327 (29%)
WD 1 214..254 7/39 (18%)
WD40 repeat 220..259 CDD:293791 7/38 (18%)
WD 2 261..302 15/40 (38%)
WD40 repeat 266..361 CDD:293791 33/96 (34%)
WD40 repeat 318..347 CDD:293791 10/28 (36%)
WD 3 362..401 22/40 (55%)
WD40 repeat 367..403 CDD:293791 20/37 (54%)
WD 4 405..445 12/39 (31%)
WD40 repeat 410..435 CDD:293791 9/24 (38%)
WD 5 450..489 4/38 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 566..619 14/42 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217312at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12442
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2212
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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