DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and Dnai3

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001128208.1 Gene:Dnai3 / 292165 RGDID:1563105 Length:921 Species:Rattus norvegicus


Alignment Length:798 Identity:147/798 - (18%)
Similarity:249/798 - (31%) Gaps:272/798 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FILSRERRRFGRQCLFTDRNEMILSVQPSGRLRLKYILRNPINER----TQLSEQYAASSV---- 64
            :::||:|.:||....|.|:|        :..::..||......::    ||:.:......:    
  Rat   186 YMISRKRSQFGAPVTFRDQN--------ASSVKDAYIECTSYPDKSYTLTQVEKDIGLQVIAEVK 242

  Fly    65 ---------LTHNVTLDSHGLNHYEGGWNVKEVNIMDEESTMRYRKKVERDDSWGIEVNQLMHAA 120
                     ...|.|     ..:|...::.:|.|::.|..::             .|....:..:
  Rat   243 DTSTQTRWAFPRNAT-----TQYYPREFSEEEKNVLVESKSL-------------AEFFSTVSTS 289

  Fly   121 MDIS-SANNAVNIYEDFFVDLPEDLGR-GISMKIAARGTHVFHDLWIPSRRLMTC-EWLNNDPNQ 182
            ::|: ..|..:|.:.|.:..|.|:... |.......:....|.||.....:::|| .|   .|..
  Rat   290 VEIALQQNEIMNTFTDDWRSLAEEESTFGDKTDTHLKEYQSFTDLHNTMEKMITCVSW---HPTI 351

  Fly   183 F---------LLFYSNRMSLTPDYTKQLNTLPDFGNDNPHAFYIWNLDDATRPAAHYDSRRVVRV 238
            :         .|.|..|:..:.....|           |.....|:..|...|....:|...:..
  Rat   352 YGLIVVSVAVRLSYEERVQNSSRLLLQ-----------PSLILFWSFSDPIHPQLMLESPDDIFC 405

  Fly   239 AKVCLRDESYMVGGLQEGQVGFW-LT------EN--QGGPKS----------------------- 271
            .:.|..|.:.:.||...||:..| :|      ||  .||.:|                       
  Rat   406 FEFCPSDPNIIAGGCINGQIILWDITAHAERIENIKTGGSRSKKATLKPMFLLEPDSNKEIMYVR 470

  Fly   272 ---MCPLEACHREATTAICWV---------------HSKLNTEFYSGSLDGSIKYWDTRDLLMPV 318
               :..:|..||:..|.|.|:               .|.:|.:..:.|.|.:|.:||.|      
  Rat   471 HCAVSSIENGHRKVITDIHWLPDSFEINRMGSVFENRSGINCQLITCSADCTICFWDIR------ 529

  Fly   319 HEVLAEPDPQTVQNRQDAHGVT-----------------FLEFEYTIPVRFI------------- 353
                  |...||.:...|...:                 .:|..:.:|..|:             
  Rat   530 ------PQKPTVTSAATATTTSTTNTNPQQPPAEKKKEESIEIPFDVPSTFLHLDLSWKPLSRIK 588

  Fly   354 ----------------------FCTDMG------------------------------------- 359
                                  .|...|                                     
  Rat   589 LSKGETSLDHCPTKLSLGEDPALCKIQGTSSIHVLLRDKMLSQMKLLKAAEINPYQNLEGGMANM 653

  Fly   360 ---------YLFVGNRKGTT-------PQDT---------IVAAYQLFAGPIRCVMRNPFFVKNF 399
                     ..|||..:|..       .:|:         .|..|.:..|.:..|.|:|||....
  Rat   654 LKPIEDFRTKFFVGTEEGEVIYTDWKMERDSETGRLMAKKPVNLYTVHDGAVHTVQRSPFFNDII 718

  Fly   400 LVVGDWRVRIWSEEVKNCPSTFYFRRPNQLLSGAWSTGRCSLFCIGDNMGNLEFWDLLMSHKRP- 463
            |.||.|.|.||.|||...|.......|.:..:|.||..|..:|.||...|.::.||||.....| 
  Rat   719 LTVGGWNVAIWKEEVLTGPLLQTCCAPKRYTAGHWSLTRPGVFYIGREDGYVDIWDLLEKTHEPA 783

  Fly   464 ------ILTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGMRSATNKEKSLMMSMFEREI 522
                  |..|.|   :....|......:.::...|...:|.:...:...:..|.|.:...||||:
  Rat   784 QSQSICITMITY---IKPWTFSSKQQFIAIADYYGTLHILEIPWTLSHPSTNEVSSVNYYFEREV 845

  Fly   523 QRCKLLEAREEEIKLKKRLTTIFLEEERKSREKLEAKKKKG----QAKKEMEPKVEDEATIFLRM 583
            :..:.::.|:|            :.||.|....:|..|||.    ::|::||.:::.|...:|. 
  Rat   846 KHLEYVQQRKE------------IREEEKKAMAMEMIKKKAKTYHRSKEQMEAELKLEYESYLE- 897

  Fly   584 IESDSEFSKALLEFNEAM 601
            :|....|:..|.:.:|.|
  Rat   898 LEQSVLFALGLGKVSEKM 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 23/114 (20%)
WD40 261..>512 CDD:225201 75/421 (18%)
WD40 279..492 CDD:295369 64/348 (18%)
WD40 repeat 284..332 CDD:293791 14/62 (23%)
WD40 repeat 386..422 CDD:293791 16/35 (46%)
WD40 repeat 429..454 CDD:293791 8/24 (33%)
Dnai3NP_001128208.1 WD40 207..>532 CDD:225201 62/368 (17%)
WD40 479..527 CDD:197651 10/47 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.