DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and DYNC1I1

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_004402.1 Gene:DYNC1I1 / 1780 HGNCID:2963 Length:645 Species:Homo sapiens


Alignment Length:380 Identity:85/380 - (22%)
Similarity:139/380 - (36%) Gaps:72/380 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EVNQLMHAAMDISSANNAVNIYE-------DFFVD-----LPE---DLGRGISMKIAARGTHVFH 161
            |..|::|:...:...:..:.:.|       |.|.|     |.|   |:..|.::..    ...|:
Human   220 EKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSGRELEEKDGDVQAGANLSF----NRQFY 280

  Fly   162 DLWIPSRRLMTC-EWLNNDPNQFLLFYSNRMSLTPDYTKQLNTLPDFGNDNPH----AFYIWNLD 221
            |......|::|| :|....|...:..|:|                  ..|.||    ...:||:.
Human   281 DEHWSKHRVVTCMDWSLQYPELMVASYNN------------------NEDAPHEPDGVALVWNMK 327

  Fly   222 -DATRP--AAHYDSRRVVRVAKVCLR--DESYMVGGLQEGQVGFWLTENQG---GPKSMCPLE-A 277
             ..|.|  ..|..|    .|..||..  ..:.:|||...||:..|  :|:.   .|....||. |
Human   328 FKKTTPEYVFHCQS----SVMSVCFARFHPNLVVGGTYSGQIVLW--DNRSHRRTPVQRTPLSAA 386

  Fly   278 CHREATTAICWVHSKLNTEFYSGSLDGSIKYWDTRDLLMPVHEVLAEPDPQTVQNRQDAHGVTFL 342
            .|......:..|.::......:.|.||.:..| :.|:|....|.:     :.|.|:.....||.:
Human   387 AHTHPVYCVNVVGTQNAHNLITVSTDGKMCSW-SLDMLSTPQESM-----ELVYNKSKPVAVTGM 445

  Fly   343 EFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGP---IRCVMR-NPFFVKNFLVVG 403
            .|.......|:..::.|.::...|.|:  :..|...::...||   |.|.|. .|....:..|..
Human   446 AFPTGDVNNFVVGSEEGTVYTACRHGS--KAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTS 508

  Fly   404 --DWRVRIWSEEVKNCPSTFYFRRPNQLLSGAWSTGRCSLFCIGDNMGNLEFWDL 456
              ||.|::|:.: .|.|...:....:.:....||....:||...|.||.|:.|:|
Human   509 SFDWTVKLWTTK-HNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRLDLWNL 562

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 16/68 (24%)
WD40 261..>512 CDD:225201 48/206 (23%)
WD40 279..492 CDD:295369 42/184 (23%)
WD40 repeat 284..332 CDD:293791 9/47 (19%)
WD40 repeat 386..422 CDD:293791 11/38 (29%)
WD40 repeat 429..454 CDD:293791 8/24 (33%)
DYNC1I1NP_004402.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Interaction with DCTN1. /evidence=ECO:0000250 2..123
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..125
Dynein_IC2 147..173 CDD:371592
Interaction with DYNLT1. /evidence=ECO:0000269|PubMed:27502274 147..163