DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and dyci-1

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001370459.1 Gene:dyci-1 / 177440 WormBaseID:WBGene00015927 Length:643 Species:Caenorhabditis elegans


Alignment Length:523 Identity:107/523 - (20%)
Similarity:182/523 - (34%) Gaps:136/523 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 HNVTLDSHGLNHYEGGWNV------KEVNIMDEESTMRYRKKVERDDSWGIEVNQLMHAAMDISS 125
            :.:|||...|:.:.....|      :|::|....:...|.|.:..||        |:|.|     
 Worm   221 YRLTLDPEFLDSFNRSCKVISRALNEEIDICINYTKDPYEKAIASDD--------LLHLA----- 272

  Fly   126 ANNAVNIYEDFFVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPNQFLLFYSNR 190
                 .:|:|                          :.|...|.:....:..:.|:...:.|.  
 Worm   273 -----QVYQD--------------------------ETWTAKRLVTGMAFSEHYPDLLAVSYG-- 304

  Fly   191 MSLTPDYTKQLNTLP-DFGNDNPHAFYIWNLDDATRPAAH--YDSRRVVRVAKVCLRDESY-MVG 251
                          | |..|:.|....:||.......|..  |....:..||  ..|..:: ::.
 Worm   305 --------------PCDIPNEPPGVIVVWNTKSKRMTAEFIVYCQSEIQSVA--FARFHAHLLLA 353

  Fly   252 GLQEGQVGFW---LTENQGGPKSMCPLEA-CHREATTAICWVHSKLNTEFYSGSLDGSIKYWDTR 312
            |.:.||:..|   ||..: .|.:..||.. .|....:.:..|.:|....|.|.|.||.|..|:..
 Worm   354 GCESGQICVWDNRLTSRK-LPINRSPLTTQAHTYTVSCLAVVGTKNAHNFVSLSRDGRICSWNVD 417

  Fly   313 DLLMPVHEVLAEPDPQTVQNRQ-DAHGVTFLEFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIV 376
            :|..||       |.:.:..:: .|...|.:.|.......|:..||.|.:...:|.|..|  .::
 Worm   418 NLTQPV-------DGKELMTKEGKAASATRMSFPIGEMQTFVVGTDTGEILAASRNGADP--AVI 473

  Fly   377 ---AAYQLFAGPIRCV-MRNPFFVKNF--LVVG---DWRVRIWSEEVKNCPSTFYFRRPNQLLSG 432
               ..|:..:|.:..: ......|.:|  |.:.   ||.|::||.:..|...:|. ..|:.:|..
 Worm   474 KTDVCYKGHSGTLTGIEFHRASGVVDFSHLFISSSHDWTVKLWSTKDANLKFSFE-SHPDLVLDV 537

  Fly   433 AWSTGRCSLFCIGDNMGNLEFWDLLMSHKRPILTIK-----YKYAVTHLVFKPDGTMLTVSLANG 492
            |||....::|...|..||:..|:|....:.|:..::     ....:..|::.|||..:.|    |
 Worm   538 AWSPVHPAVFASIDADGNIFVWNLNEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVFV----G 598

  Fly   493 DCLMLRLEEGMRSATNKEKSLMMSMFEREIQRCKLLEAREEEIKLKKRLTTIF---LEEERKSRE 554
            |      :||                     |..:.:.||....||......|   |.:.::|.|
 Worm   599 D------DEG---------------------RVHMYDVRESLYVLKSEEWNRFARVLSDMKQSNE 636

  Fly   555 KLE 557
            :.|
 Worm   637 EAE 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 18/69 (26%)
WD40 261..>512 CDD:225201 63/269 (23%)
WD40 279..492 CDD:295369 53/227 (23%)
WD40 repeat 284..332 CDD:293791 13/47 (28%)
WD40 repeat 386..422 CDD:293791 9/41 (22%)
WD40 repeat 429..454 CDD:293791 8/24 (33%)
dyci-1NP_001370459.1 WD40 repeat 286..333 CDD:293791 9/62 (15%)
WD40 repeat 339..383 CDD:293791 12/46 (26%)
WD40 382..>611 CDD:421866 58/269 (22%)
WD40 repeat 388..457 CDD:293791 18/75 (24%)
WD40 repeat 487..528 CDD:293791 9/40 (23%)
WD40 repeat 534..573 CDD:293791 11/38 (29%)
WD40 repeat 581..609 CDD:293791 10/58 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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