DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and wdr-60

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001367569.1 Gene:wdr-60 / 175676 WormBaseID:WBGene00016165 Length:668 Species:Caenorhabditis elegans


Alignment Length:576 Identity:112/576 - (19%)
Similarity:189/576 - (32%) Gaps:145/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SRERRRFGR--------------QCLFTDRNEMILSVQPSGRLRLKYILRNPINER---TQLSEQ 58
            ::|:|.|||              ..:|||.:..|.  :|...|        |.|:.   ||..:.
 Worm   149 TQEQRAFGRLNKLRGLISIEVTKSQVFTDLSSNIF--EPFNSL--------PSNKSHALTQTGKD 203

  Fly    59 YAASSVLTHNVTLDSHGLNHYEGGWNVKEVNIMDEESTMRYRKKV--ERDDSWGIEVNQLMHAAM 121
            .....|.|.            .|....||......||| |....:  ||..:....:.:...|| 
 Worm   204 CHTEEVQTE------------RGETEEKETQCPHSEST-RIEDGIEKERTSTDRARLKKFFFAA- 254

  Fly   122 DISSANNAVNIYEDFFVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPNQFLLF 186
              :.....:.|.||...:  ||..|..|:...:||.:.|....:.::...|| ....:.:..|:.
 Worm   255 --TQTIREILISEDKSAE--EDETREKSISKFSRGYNPFRLCQVVTKSKSTC-IRKGESDSVLVA 314

  Fly   187 YSNRMSLTPDYTKQLNTLPDFGNDN--PHAFY-------IWNLDDATRPAAHYDSRRVVRVAKVC 242
            |....|..||...:...:..|.:..  |...:       :..|..::            ::..||
 Worm   315 YEIFESPAPDLINKSLIVEFFVHKRRPPKRLFVVESIVSVMELSQSS------------QILYVC 367

  Fly   243 LRDESYMVGGLQEGQVGF-----WLTENQGGPKSMCPLEACHREATT--------AICWVHSKLN 294
            |.|.::....|......|     |: :::.......|.......|||        .|....|.:.
 Worm   368 LMDGTFCAFDLSITDAFFDDNLPWV-DSETNIALRRPTFDSSFLATTVSDATPLIGIALGKSSVG 431

  Fly   295 TEFYSGSLDGSIKYW-----DTRDLLMPVHEVLAEPDPQTVQNRQDAHGVTFLEFEY---TIPVR 351
            .|..:....|:|.||     :..:|.:.:..|:.   |..|..|   |..:|....:   |.|:|
 Worm   432 EEITTIDTAGTISYWIANRVEKNELRLLLTAVIR---PHPVLKR---HSTSFAVSAFCHVTNPLR 490

  Fly   352 FIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFA------GPIRCVMRNPFFVKNFLVVG--DWRVR 408
            |...||.|.|:     .....||..|..:::.      |.:..:..|| .....|:||  :..:.
 Worm   491 FFIGTDTGMLY-----SMYKSDTSQAIPKIYKTEKEKYGEVTVIAANP-SDNTVLIVGFSNGSIS 549

  Fly   409 IW----SEEVKNCPSTFYFRRPNQLLSGAWSTGRCSLFCIGDNMGNLEFWDLLMSHKRPILTIKY 469
            ::    :..:.|.|:.....|...:   :||....|.|....|...:.:|||           .:
 Worm   550 VYRTTQASSIVNIPTADLSTRVTWI---SWSLTNPSGFYTIHNSNIITYWDL-----------GF 600

  Fly   470 KYAVTHLVFKPDGTMLTVS----------------LANGDCLMLRLEEGMRSATNK 509
            |.:...:..:.|...:..|                |:|||..:..||:..|...|:
 Worm   601 KLSPKSVDHRTDSVQVLASDTWLSENAKIGYMAFGLSNGDSEVHVLEDPARKNQNE 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 15/82 (18%)
WD40 261..>512 CDD:225201 58/293 (20%)
WD40 279..492 CDD:295369 49/256 (19%)
WD40 repeat 284..332 CDD:293791 12/60 (20%)
WD40 repeat 386..422 CDD:293791 7/41 (17%)
WD40 repeat 429..454 CDD:293791 5/24 (21%)
wdr-60NP_001367569.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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