DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10859 and Dync1i2

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001185801.1 Gene:Dync1i2 / 13427 MGIID:107750 Length:655 Species:Mus musculus


Alignment Length:486 Identity:97/486 - (19%)
Similarity:175/486 - (36%) Gaps:86/486 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 DEESTMRYRKKVERDDSWG-------IEVNQLMHAAMDIS-----------SANNAVNIYEDF-- 136
            :||.|:   ||.|.:||..       .|..|::|:...:|           :.:..:||:.|:  
Mouse   205 EEEKTL---KKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG 266

  Fly   137 --FVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPNQFLLFYSNRMSLTPDYTK 199
              ..|...::..|..:.:   ....|.:.|...|.:...:|.:..|...:..|:|          
Mouse   267 RDLEDKEGEIQAGAKLSL---NRQFFDERWSKHRVVSCLDWSSQYPELLVASYNN---------- 318

  Fly   200 QLNTLPDFGNDNPH----AFYIWNLD-DATRPAAHYDSRRVVRVAKVCLRDESYMVGGLQEGQVG 259
                    ..:.||    ...:||:. ..|.|...:..:..|..|.......:.:|||...||:.
Mouse   319 --------NEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIV 375

  Fly   260 FW-LTENQGGPKSMCPLE-ACHREATTAICWVHSKLNTEFYSGSLDGSIKYWDTRDLLMPVHEVL 322
            .| ...|:..|....||. |.|......:..|.::......|.|.||.|..|..        ::|
Mouse   376 LWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSL--------DML 432

  Fly   323 AEPDP--QTVQNRQDAHGVTFLEFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGP 385
            :.|..  :.|..:..|..||.:.|.......|:..::.|.::...|.|:  :..|...::...||
Mouse   433 SHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGS--KAGISEMFEGHQGP 495

  Fly   386 IRCV----------MRNPFFVKNFLVVGDWRVRIWSEEVKNCPSTFYFRRPNQLLSGAWSTGRCS 440
            |..:          ..:.|...:|    ||.|::|:.: .|.|...:....:.:....||....:
Mouse   496 ITGIHCHAAVGAVDFSHLFVTSSF----DWTVKLWTTK-NNKPLYSFEDNSDYVYDVMWSPTHPA 555

  Fly   441 LFCIGDNMGNLEFWDLLMSHKRPI--LTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGM 503
            ||...|.||.|:.|:|....:.|.  ::::...|:..:.:...|..:.|..:.|..::..:.|.:
Mouse   556 LFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQI 620

  Fly   504 RSATNKEKSLMMSMFEREIQRCKLLEAREEE 534
            ....|.|    .:.|.|.:.......|..||
Mouse   621 AVPRNDE----WARFGRTLAEINANRADAEE 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 18/66 (27%)
WD40 261..>512 CDD:225201 55/266 (21%)
WD40 279..492 CDD:295369 45/226 (20%)
WD40 repeat 284..332 CDD:293791 10/49 (20%)
WD40 repeat 386..422 CDD:293791 9/45 (20%)
WD40 repeat 429..454 CDD:293791 8/24 (33%)
Dync1i2NP_001185801.1 Dynein_IC2 152..180 CDD:288403
WD40 repeat 299..348 CDD:293791 10/66 (15%)
WD40 346..>616 CDD:225201 59/284 (21%)
WD40 repeat 356..394 CDD:293791 10/37 (27%)
WD40 397..>622 CDD:295369 47/239 (20%)
WD40 repeat 402..443 CDD:293791 9/48 (19%)
WD40 repeat 451..498 CDD:293791 11/48 (23%)
WD40 repeat 506..538 CDD:293791 8/36 (22%)
WD40 repeat 544..582 CDD:293791 11/37 (30%)
WD40 repeat 590..616 CDD:293791 3/25 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1587
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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