DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10859 and Dync1i2

DIOPT Version :10

Sequence 1:NP_609651.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001185801.1 Gene:Dync1i2 / 13427 MGIID:107750 Length:655 Species:Mus musculus


Alignment Length:486 Identity:97/486 - (19%)
Similarity:175/486 - (36%) Gaps:86/486 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 DEESTMRYRKKVERDDSWG-------IEVNQLMHAAMDIS-----------SANNAVNIYEDF-- 136
            :||.|:   ||.|.:||..       .|..|::|:...:|           :.:..:||:.|:  
Mouse   205 EEEKTL---KKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIFFDYSG 266

  Fly   137 --FVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTCEWLNNDPNQFLLFYSNRMSLTPDYTK 199
              ..|...::..|..:.:   ....|.:.|...|.:...:|.:..|...:..|:|          
Mouse   267 RDLEDKEGEIQAGAKLSL---NRQFFDERWSKHRVVSCLDWSSQYPELLVASYNN---------- 318

  Fly   200 QLNTLPDFGNDNPH----AFYIWNLD-DATRPAAHYDSRRVVRVAKVCLRDESYMVGGLQEGQVG 259
                    ..:.||    ...:||:. ..|.|...:..:..|..|.......:.:|||...||:.
Mouse   319 --------NEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIV 375

  Fly   260 FW-LTENQGGPKSMCPLE-ACHREATTAICWVHSKLNTEFYSGSLDGSIKYWDTRDLLMPVHEVL 322
            .| ...|:..|....||. |.|......:..|.::......|.|.||.|..|..        ::|
Mouse   376 LWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSL--------DML 432

  Fly   323 AEPDP--QTVQNRQDAHGVTFLEFEYTIPVRFIFCTDMGYLFVGNRKGTTPQDTIVAAYQLFAGP 385
            :.|..  :.|..:..|..||.:.|.......|:..::.|.::...|.|:  :..|...::...||
Mouse   433 SHPQDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGS--KAGISEMFEGHQGP 495

  Fly   386 IRCV----------MRNPFFVKNFLVVGDWRVRIWSEEVKNCPSTFYFRRPNQLLSGAWSTGRCS 440
            |..:          ..:.|...:|    ||.|::|:.: .|.|...:....:.:....||....:
Mouse   496 ITGIHCHAAVGAVDFSHLFVTSSF----DWTVKLWTTK-NNKPLYSFEDNSDYVYDVMWSPTHPA 555

  Fly   441 LFCIGDNMGNLEFWDLLMSHKRPI--LTIKYKYAVTHLVFKPDGTMLTVSLANGDCLMLRLEEGM 503
            ||...|.||.|:.|:|....:.|.  ::::...|:..:.:...|..:.|..:.|..::..:.|.:
Mouse   556 LFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQI 620

  Fly   504 RSATNKEKSLMMSMFEREIQRCKLLEAREEE 534
            ....|.|    .:.|.|.:.......|..||
Mouse   621 AVPRNDE----WARFGRTLAEINANRADAEE 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_609651.1 WD40 <245..310 CDD:475233 18/66 (27%)
WD40 279..492 CDD:475233 45/226 (20%)
WD40 repeat 284..332 CDD:293791 10/49 (20%)
WD40 repeat 386..422 CDD:293791 9/45 (20%)
WD40 repeat 429..454 CDD:293791 8/24 (33%)
Dync1i2NP_001185801.1 Dynein_IC2 150..180 CDD:463291
WD40 repeat 299..348 CDD:293791 10/66 (15%)
WD40 <327..430 CDD:441893 25/110 (23%)
WD40 repeat 356..394 CDD:293791 10/37 (27%)
WD40 397..>622 CDD:475233 47/239 (20%)
WD40 repeat 402..443 CDD:293791 9/48 (19%)
WD40 repeat 451..498 CDD:293791 11/48 (23%)
WD40 repeat 506..538 CDD:293791 8/36 (22%)
WD40 repeat 544..582 CDD:293791 11/37 (30%)
WD40 repeat 590..616 CDD:293791 3/25 (12%)
Blue background indicates that the domain is not in the aligned region.

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