DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10859 and dnai3

DIOPT Version :9

Sequence 1:NP_001285898.1 Gene:CG10859 / 34756 FlyBaseID:FBgn0032520 Length:627 Species:Drosophila melanogaster
Sequence 2:NP_001120428.1 Gene:dnai3 / 100145513 XenbaseID:XB-GENE-980327 Length:896 Species:Xenopus tropicalis


Alignment Length:794 Identity:146/794 - (18%)
Similarity:233/794 - (29%) Gaps:276/794 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QFILSRERRRFGRQCLFTDRNE-------MILSVQPSGRLRLKYILRNPINERTQLSEQYAASSV 64
            :|::||.:|:||.:..|.|.|.       |..:.....|..:|      ||||..          
 Frog   194 KFMISRIQRKFGAKVNFGDHNASDVKDGYMECTSYQDKRFSIK------INERDT---------- 242

  Fly    65 LTHNVTLDSHGLNHYEGGWNVKEVNIMDEESTMRYRKKVERDDSWGIEVNQ-LMHAAMDIS-SAN 127
                               .::.|....|.||         ...||...|. ..:...:.: ...
 Frog   243 -------------------GIQVVPFTQENST---------QTKWGYPRNACTQYTPREFTEEER 279

  Fly   128 NAVNIYEDFFVDLPEDLGRGISMKIAARGTHVFHDLWIPSRRLMTC---EW--LNNDPNQFLLFY 187
            .|....:||     :|....:|:::         :|.:....:|..   :|  |:.:.|.|....
 Frog   280 KACLSSKDF-----KDFVNSVSLRL---------ELALQQNEIMNAFLDDWKALSEEENTFGGKS 330

  Fly   188 SNRMSLTPDYTKQLNTLPDFGND--------------------------------------NPHA 214
            .:.:..:..:|..|     |.|.                                      .|..
 Frog   331 DSHLKESQSFTDHL-----FSNAKTISGINWHPKIHGLVAVSMTERLSFEDRVNISSKILLKPSL 390

  Fly   215 FYIWNLDDATRPAAHYDSRRVVRVAKVCLRDESYMVGGLQEGQVGFW--------LTENQGGPKS 271
            ...|:..|...|....:....:...:.|..|.:.:.||...|||..|        |....|..|:
 Frog   391 ILFWSFTDPLHPQLMLECPDDIYCFQFCPSDPNIIAGGCFNGQVVLWDISKYQESLMAKAGVSKN 455

  Fly   272 MCP----------------------LEACHREATTAICWVHSKLNT-------EFYSG------- 300
            ..|                      :|..|:...|.|.|:.:....       |..||       
 Frog   456 TAPKTGLEPSVPKGPQLVRYCAVSSIEHGHKNVITDIHWLPNNFELSNAGNPYENKSGYCLQLVT 520

  Fly   301 -SLDGSIKYWDTRDLLMPVHEVLAEPDPQTVQNRQDAHGV--TF-------------------LE 343
             |.|.||.:||.|.     .:.|...:.:.|:::|..|||  ||                   :.
 Frog   521 CSPDCSIMFWDIRP-----QKTLTAAEKKNVEDKQMPHGVPDTFKYIDLTWRPFIRAILPKSDMS 580

  Fly   344 FEYT--------------------------------------------------IPVRFIFCTDM 358
            .||:                                                  |..::...|:.
 Frog   581 GEYSPMKISLSEEHHHCRTLDKLQIQAKEDKTEGVVEYKSLRAASAKNPKLLDDINTKYFVGTED 645

  Fly   359 GYLFVGNRKGTTPQDT--IVAAYQLFA-----GPIRCVMRNPFFVKNFLVVGDWRVRIWSEEVKN 416
            |.|...:.|.....||  ::::..|.|     |.:..|.|:||.....|.||.|...||.|.|.:
 Frog   646 GELVYTDWKMEKDSDTGKLISSKPLQANILHDGAVNTVQRSPFLKDFILTVGGWNFAIWREGVTS 710

  Fly   417 CPSTFYFRRPNQLLSGAWSTGRCSLFCIGDNMGNLEFWDLLMSHKRPILTIKYKYA-VTHL---V 477
            .|.........:|.:..||..|..:|.||...||::.||||.....|..|.....| :|::   :
 Frog   711 GPIFHSCCSQKRLTAAHWSLSRTGVFFIGKEDGNVDVWDLLEKTHEPSQTQNIAAAPITYIRPWI 775

  Fly   478 FKPDGTMLTVSLANGDCLMLRLEEGMRSATNKEKSLMMSMFEREIQRCKLLEAREEEIKLKKRLT 542
            .......|.|....|...:|.:...:|..:..|.:.:...||||::..                 
 Frog   776 ASSKQHFLAVGDDQGTLHILEIPWNLRHPSANENASVQHYFEREVKHV----------------- 823

  Fly   543 TIFLEEERKSREKLEAKKKKGQAKKEMEPKVEDEATIFLR---MIESDSEFSKALLEFNEAMENV 604
                 |....||.|.|..||....|::..|.|....:..:   .:|...|:...|......:..:
 Frog   824 -----EYSNQREGLRATAKKQLELKDLSAKTETSPPVKTKEQTEVEQSKEYELYLQFEGSILSGL 883

  Fly   605 AIQRSKRTFAMERT 618
            .:.:.|.    |||
 Frog   884 GLSKEKE----ERT 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10859NP_001285898.1 WD40 <245..310 CDD:295369 23/109 (21%)
WD40 261..>512 CDD:225201 76/377 (20%)
WD40 279..492 CDD:295369 66/309 (21%)
WD40 repeat 284..332 CDD:293791 15/62 (24%)
WD40 repeat 386..422 CDD:293791 13/35 (37%)
WD40 repeat 429..454 CDD:293791 9/24 (38%)
dnai3NP_001120428.1 WD40 <343..>548 CDD:225201 36/214 (17%)
WD40 repeat 723..763 CDD:293791 15/39 (38%)
WD40 repeat 769..814 CDD:293791 7/44 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.