DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16957 and pgrmc1

DIOPT Version :10

Sequence 1:NP_609650.1 Gene:CG16957 / 34755 FlyBaseID:FBgn0032519 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001007393.1 Gene:pgrmc1 / 492520 ZFINID:ZDB-GENE-041114-91 Length:179 Species:Danio rerio


Alignment Length:196 Identity:64/196 - (32%)
Similarity:111/196 - (56%) Gaps:25/196 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAESSKGMEHTTSWYCKLYNSLKETPIDVTLLIMSIVVFLKLGFFARRLSREEPDFSDDNNQEVD 65
            |||  :.:|.|:....:::.|    |::::||.:.:.:..|:      :..::|  :|....|..
Zfish     1 MAE--EAVEQTSGILQEIFTS----PLNISLLCLCLFLLYKI------IRGDKP--ADYGPVEEP 51

  Fly    66 LPPLRK-DFTVRELREYDGTRADGRILVAILFNIYDVSRSVHYYGRNGVNPNYAGRDISRILIN- 128
            ||.|:| |||:.:|:||||.: :.|||:|:...::||:|...:||..|....:||:|.||.|.. 
Zfish    52 LPKLKKRDFTLADLQEYDGLK-NPRILMAVNGKVFDVTRGKKFYGPEGPYGVFAGKDASRGLATF 115

  Fly   129 --SPEDLKDSEDFDDLSDLSRNQMNTLREWEQRYKMKYPFVGKL----KEKLQINEEEDFELQQA 187
              ..|.|||:.  ||||||:..|..:|.|||.::..||.::|||    :|..:..::|:.:.::.
Zfish   116 CLEKEALKDTH--DDLSDLNAMQQESLSEWETQFTQKYDYIGKLLKPGEEPTEYTDDEEVKDKKK 178

  Fly   188 D 188
            |
Zfish   179 D 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16957NP_609650.1 Cyt-b5 74..>127 CDD:459698 21/52 (40%)
pgrmc1NP_001007393.1 Cyt-b5 61..123 CDD:459698 23/62 (37%)

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