DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16957 and Pgrmc1

DIOPT Version :10

Sequence 1:NP_609650.1 Gene:CG16957 / 34755 FlyBaseID:FBgn0032519 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_068534.2 Gene:Pgrmc1 / 291948 RGDID:70890 Length:195 Species:Rattus norvegicus


Alignment Length:179 Identity:64/179 - (35%)
Similarity:96/179 - (53%) Gaps:20/179 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LYNSLKETPIDVTLLIMSIVVFLKLGFFARRLSREEPDFSDDNNQEVDLPPL----RKDFTVREL 78
            |...:..:|:::.||.:.|.:..|:      :..::|..|.||:.: :.|||    .:|||..||
  Rat    21 LLQEIFTSPLNLLLLGLCIFLLYKI------VRGDQPGASGDNDDD-EPPPLPRLKPRDFTPAEL 78

  Fly    79 REYDGTRADGRILVAILFNIYDVSRSVHYYGRNGVNPNYAGRDISRILIN---SPEDLKDSEDFD 140
            |.|||.: |.|||:||...::||::...:||..|....:||||.||.|..   ..|.|||  ::|
  Rat    79 RRYDGVQ-DPRILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKD--EYD 140

  Fly   141 DLSDLSRNQMNTLREWEQRYKMKYPFVGKLKEKLQINEEEDFELQQADP 189
            |||||:..|..||.:|:.::..||..||||   |:..||........:|
  Rat   141 DLSDLTPAQQETLNDWDSQFTFKYHHVGKL---LKEGEEPTVYSDDEEP 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16957NP_609650.1 Cyt-b5 74..>127 CDD:459698 24/52 (46%)
Pgrmc1NP_068534.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..72 7/21 (33%)
Cyt-b5 74..137 CDD:459698 27/63 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..195 3/14 (21%)

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