DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL24 and STV1

DIOPT Version :10

Sequence 1:NP_609649.1 Gene:RpL24 / 34754 FlyBaseID:FBgn0032518 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_190870.1 Gene:STV1 / 824468 AraportID:AT3G53020 Length:163 Species:Arabidopsis thaliana


Alignment Length:160 Identity:67/160 - (41%)
Similarity:93/160 - (58%) Gaps:11/160 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEE 65
            :|..||.|||.|||||.|...::.|.:.|.||:.||:|.:..|..|.|:.||.:||::|:|...:
plant     3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQ 67

  Fly    66 EASKKRTRRTQK-FQRAIVGASLAEILAKRNMKPEVRKAQRDQAIKVAKEQKRAVKAAKK----- 124
            ||.|:|.|.|:| :.|:||||:|..|..||..|||||.|.|:.|::..||:.:..|..||     
plant    68 EAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEKKAKKVE 132

  Fly   125 -AAAPAPAKKSAPKQKAAKVTQKAAPRVGG 153
             |:.....|.:.||..||    ...|:|||
plant   133 FASKQQKVKANFPKAAAA----SKGPKVGG 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL24NP_609649.1 Ribosomal_L24e 2..63 CDD:460131 28/60 (47%)
STV1NP_190870.1 Ribosomal_L24e 4..64 CDD:460131 27/59 (46%)

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