DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL24 and rsl24d1

DIOPT Version :10

Sequence 1:NP_609649.1 Gene:RpL24 / 34754 FlyBaseID:FBgn0032518 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_998158.1 Gene:rsl24d1 / 406266 ZFINID:ZDB-GENE-040426-1925 Length:161 Species:Danio rerio


Alignment Length:171 Identity:54/171 - (31%)
Similarity:77/171 - (45%) Gaps:34/171 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEE 65
            |:|..|.|....:|||||...|:.|.|.|.|...||.:::..||||||..||..:|:...|.:..
Zfish     1 MRIEKCYFCSAPVYPGHGMMFVRNDCKVFRFCRSKCHKNFKKKRNPRKTRWTKAFRKSAGKELTV 65

  Fly    66 EAS---KKRTRRTQKFQRAIVGASLAEILAKRNMKPEVRKAQRDQAIKVAKEQKRAV-------K 120
            :.|   :||.....|:.|        |:.:|     .|...::.::|| .|.|.|.:       |
Zfish    66 DNSLEFEKRRNTPVKYNR--------ELWSK-----TVEAMRKVESIK-HKRQARFIMNRLKKGK 116

  Fly   121 AAKKAAAPAPAKKS-----AP-----KQKAAKVTQKAAPRV 151
            ..:|||..:..||:     ||     ||...|:.||.|..|
Zfish   117 ELEKAADISEVKKNIHLIKAPHAGQAKQLEDKMVQKLAEDV 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL24NP_609649.1 Ribosomal_L24e 2..63 CDD:460131 25/60 (42%)
rsl24d1NP_998158.1 Ribosomal_L24e 2..64 CDD:460131 25/61 (41%)

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