DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL24 and Rpl24l1

DIOPT Version :10

Sequence 1:NP_609649.1 Gene:RpL24 / 34754 FlyBaseID:FBgn0032518 Length:155 Species:Drosophila melanogaster
Sequence 2:XP_038956284.1 Gene:Rpl24l1 / 367865 RGDID:1560821 Length:194 Species:Rattus norvegicus


Alignment Length:195 Identity:99/195 - (50%)
Similarity:120/195 - (61%) Gaps:41/195 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIGLCAFSGYKIYPGHGKTMVKIDGK-------------------------------------S 28
            ||:.||:|||||||||||:...:.|.|                                     .
  Rat     1 MKVELCSFSGYKIYPGHGRHYARTDRKVFQFLSFFLSFFFFFWFFFSELGTESRALHFLGKCSTV 65

  Fly    29 FTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEILAK 93
            |.||:.|||.::|.||||:::.|||||||||:||..||..||||.|..||||||.|||:|:|:||
  Rat    66 FQFLNDKCESAFLSKRNPQQINWTVLYRRKHKKGQLEEIQKKRTSRAVKFQRAITGASVADIMAK 130

  Fly    94 RNMKPEVRKAQRDQAIKVAKEQKRAVKAAKK---AAAPAPAKKSAPKQKAAKVTQKAAPRVGGKR 155
            :|.|||||||||.|||:.|||.|:|.:|.||   |||.||. |:.||||..|..:.:||||||||
  Rat   131 KNQKPEVRKAQRKQAIRAAKEAKKAKQAWKKTAMAAAKAPT-KADPKQKILKPMKVSAPRVGGKR 194

  Fly   156  155
              Rat   195  194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL24NP_609649.1 Ribosomal_L24e 2..63 CDD:460131 37/97 (38%)
Rpl24l1XP_038956284.1 Ribosomal_L24e_L24 1..147 CDD:469985 71/145 (49%)
Ribosomal_L24e 2..100 CDD:460131 37/97 (38%)

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