DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL24 and rsl-24D1

DIOPT Version :10

Sequence 1:NP_609649.1 Gene:RpL24 / 34754 FlyBaseID:FBgn0032518 Length:155 Species:Drosophila melanogaster
Sequence 2:NP_492572.1 Gene:rsl-24D1 / 172815 WormBaseID:WBGene00004437 Length:162 Species:Caenorhabditis elegans


Alignment Length:159 Identity:47/159 - (29%)
Similarity:71/159 - (44%) Gaps:14/159 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGIEE 65
            |:|..|.|....||||||...|:.|...|.|...:|.:.:..|:||||:.:|...||...|.:..
 Worm     1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARGKELIN 65

  Fly    66 EASKKRTRRTQK--------FQRAIVGASLAEILAKRNMKPEVRKAQRDQAIKVAKEQKRAVKAA 122
            :|::...:|..:        ||:.|..|.....|..:.....:||  |.|..|:.:::....|..
 Worm    66 DATQLLEQRRDEPVKYERAMFQKTIEAAKTISALKTKRYGNLIRK--RLQPGKIVQKKGLLAKVD 128

  Fly   123 KK---AAAPAPAKKSAPKQKAAKVTQKAA 148
            ||   ..||. |.:...|.:||...:|.|
 Worm   129 KKMHLIRAPV-ANRDGVKTRAAAKEKKTA 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL24NP_609649.1 Ribosomal_L24e 2..63 CDD:460131 23/60 (38%)
rsl-24D1NP_492572.1 Ribosomal_L24e 2..64 CDD:460131 23/61 (38%)

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