DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and Rab18

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster


Alignment Length:164 Identity:65/164 - (39%)
Similarity:101/164 - (61%) Gaps:3/164 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    33 KLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLI 97
            |||.:||..|||:|:|.||:.|.|......|:|:||.||.|.::....::.||||||.|||.||.
  Fly     7 KLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERFRSLT 71

Human    98 PSYIRDSTIAVVVYDITNINSFKETDKWVEHVRA-ERGDDVVIMLLGNKIDLDNKRQVTAEQGEE 161
            ||:.|.:..|::|||||:.:|..:.:.|:..:.: ....::.|:::||||  |.:|.|..|:|.:
  Fly    72 PSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKI--DEERVVDREEGRK 134

Human   162 KSRNLNVMFIETSAKTGYNVKKLFRRVASALLST 195
            .:|....:|||||||....|..:|:.|...::|:
  Fly   135 FARKHRALFIETSAKCDQFVSDVFKDVVEKIVSS 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 64/159 (40%)
Rab18NP_524744.2 Rab18 6..165 CDD:206656 64/159 (40%)

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