DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and RabX1

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster


Alignment Length:189 Identity:55/189 - (29%)
Similarity:108/189 - (57%) Gaps:6/189 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    31 KSKLLFLGEQSVGKTSIISRFMYNSFGC--ACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERF 93
            :.|:|.||.:.||||.::.|::.|:...  :...|:.:.|.:..:.|::..::||:||||||||:
  Fly     5 EGKVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERY 69

Human    94 HSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQ 158
            .::.|.|.|::..|::|:|:|...:|.|...|::.:.....|.:::.|:|||:|:..:|.|:.|:
  Fly    70 RAVAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREE 134

Human   159 GEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPPPKEGSILFPSFAGVGSI 217
            ....:.::...:.|||.:|...::::|...|..|:  |.:...|..|:  .||....|:
  Fly   135 AFVFATSIGATYFETSTETDQGLEQVFISTAQGLV--RLADEGKSPSL--RSFQSTDSL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 48/160 (30%)
RabX1NP_524713.1 Rab 7..166 CDD:206640 47/158 (30%)

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