DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB41 and Rab8

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster


Alignment Length:182 Identity:73/182 - (40%)
Similarity:112/182 - (61%) Gaps:5/182 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    33 KLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLI 97
            |||.:|:..||||.|:.||..::|.....:|:||||..:|:.|:::.::||:|||||||||.::.
  Fly    10 KLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQERFRTIT 74

Human    98 PSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEK 162
            .:|.|.:...::|||||...||:....|:.::......||..||||||.:|.:||||:.|:||:.
  Fly    75 TAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKERGEQL 139

Human   163 SRNLNVMFIETSAKTGYNVKKLFRRVASALLS-----TRTSPPPKEGSILFP 209
            :....:.|:|||||...||::.|..:||.:.:     ...:.|||.|..|.|
  Fly   140 AIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNPPKGGHQLKP 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 67/158 (42%)
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 67/161 (42%)

Return to query results.
Submit another query.