DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and RabX5

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_647644.2 Gene:RabX5 / 38209 FlyBaseID:FBgn0035255 Length:277 Species:Drosophila melanogaster


Alignment Length:176 Identity:58/176 - (32%)
Similarity:104/176 - (59%) Gaps:6/176 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    18 LEAAERTEYQSLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQL 82
            |||..:.:::. |  |::|:|:.|||||:|::||.|:.|....:||:|:||..:...:......|
  Fly    54 LEAPRKPKFRP-C--KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSL 115

Human    83 QLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEH-VRAERGDDVVIMLLGNKI 146
            ::|||||||||..:..:|.|::::.||.||::..:|.:...||:.. :........::.|:|.|.
  Fly   116 EMWDTAGQERFRCIAGAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKA 180

Human   147 DLDNKRQ-VTAEQ-GEEKSRNLNVMFIETSAKTGYNVKKLFRRVAS 190
            ||.:|.: |..|: ....:..|...:...||::|:.|.:||:|:|:
  Fly   181 DLLSKEEFVRMERLAGLAAAELQAEYWSVSARSGFKVTELFQRIAA 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 54/161 (34%)
RabX5NP_647644.2 P-loop containing Nucleoside Triphosphate Hydrolases 66..230 CDD:476819 54/161 (34%)

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