DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and Rab6

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:192 Identity:131/192 - (68%)
Similarity:152/192 - (79%) Gaps:12/192 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    11 MEAGGFGLEAAERTEYQSLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYL 75
            |.:|.||         ..|.|.||:|||||||||||:|:||||:||....|||:|||||||||||
  Fly     1 MSSGDFG---------NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYL 56

Human    76 EDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIM 140
            ||:.|:||||||||||||.|||||||||||:|||||||||.|||.:|.||::.||.|||.||:||
  Fly    57 EDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIM 121

Human   141 LLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALL---STRTSP 199
            |:|||.||.:||||:.|:||.|::.|||||||||||.|||||:||||||:||.   ||...|
  Fly   122 LVGNKTDLSDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMDSTENKP 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 120/158 (76%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 120/159 (75%)

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