DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and Rab5

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster


Alignment Length:195 Identity:77/195 - (39%)
Similarity:118/195 - (60%) Gaps:10/195 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    14 GGFGLEAAER---TEYQSLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYL 75
            |..|...|:|   |.....|:.||:.|||.:|||:|::.||:...|....::|:|..||::|:.:
  Fly     9 GASGTGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICI 73

Human    76 EDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIM 140
            ||.:|:.::||||||||:|||.|.|.|.:..|:|||||.|.:||:....||:.:..:...::||.
  Fly    74 EDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIA 138

Human   141 LLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPPPKEGS 205
            |.|||.||.|.|.|..::.::.:....::|:|||||||.||..:|..:|..|       |..:|:
  Fly   139 LAGNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL-------PKNDGA 196

Human   206  205
              Fly   197  196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 68/158 (43%)
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 69/168 (41%)

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