DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and Rab35

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:177 Identity:64/177 - (36%)
Similarity:106/177 - (59%) Gaps:3/177 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    33 KLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLI 97
            |||.:|:..|||:|::.||..::|..:...|:|:||..:|:.:|...|:||:|||||||||.::.
  Fly    10 KLLIIGDSGVGKSSLLIRFSDDTFSGSYITTIGVDFKIRTVDIEGMRVKLQIWDTAGQERFRTIT 74

Human    98 PSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEK 162
            .:|.|.:...:||||:||..||....:|:|.:: ...|.|..:|:|||.|..:::.|..|..:..
  Fly    75 STYYRGTHGVIVVYDVTNGESFANVRRWLEEIQ-NNCDVVKKVLVGNKNDDPDRKVVITEDAQRF 138

Human   163 SRNLNVMFIETSAKTGYNVKKLFRRVASALL--STRTSPPPKEGSIL 207
            ::.:::...|||||...||:.:|..:...:|  ..||||..::...|
  Fly   139 AKQMDIELFETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 58/158 (37%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 64/177 (36%)

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