DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB41 and Rab9Fb

DIOPT Version :10

Sequence 1:XP_011529250.1 Gene:RAB41 / 347517 HGNCID:18293 Length:239 Species:Homo sapiens
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:188 Identity:74/188 - (39%)
Similarity:106/188 - (56%) Gaps:18/188 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    33 KLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLI 97
            |:|.||:..|||:.::.||..|.|......|||:||..:.:.|..::|.||:|||||.|||.||:
  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73

Human    98 PSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKI-DLDNKRQVTAEQGEE 161
            |||.|.:...::|||||:..||:..|.|::.:|....:.|.:||:|||. |||| |||..|||..
  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDN-RQVRMEQGFN 137

Human   162 KSRNLNVMFIETSAKTGYNVKKLF----------------RRVASALLSTRTSPPPKE 203
            .:.:..:.|.|.|||:|.||..:|                .|::....:..|:.||.|
  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDE 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB41XP_011529250.1 Rab6 33..192 CDD:206654 70/175 (40%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 69/156 (44%)

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