Sequence 1: | NP_609646.1 | Gene: | loqs / 34751 | FlyBaseID: | FBgn0032515 | Length: | 465 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445888.1 | Gene: | Stau1 / 84496 | RGDID: | 621778 | Length: | 495 | Species: | Rattus norvegicus |
Alignment Length: | 407 | Identity: | 96/407 - (23%) |
---|---|---|---|
Similarity: | 151/407 - (37%) | Gaps: | 111/407 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 134 KTPVSILQELLSRRGITPGYE---LVQI---EGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEA 192
Fly 193 KHAAARALIDKLIGAQLPESPS---------SSAGPSVTGLTVAGSGGDGNANATGGGDASDKTV 248
Fly 249 GNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMW 313
Fly 314 MRL-----------------QETPI----DSGKISDSICGELEGEPRSSENYYGELKDISVPTLT 357
Fly 358 TQ--------------HSNKVSQFHKTLKNA--------------TGKKLL-----KLQKTCLKN 389
Fly 390 N----------KIDYIKLLGEIATENQFEVTYVDIEEKTFSGQFQC--LVQLSTLPVGVCHGSGP 442
Fly 443 TAADAQRHAAQNALEYL 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
loqs | NP_609646.1 | DSRM | 136..204 | CDD:214634 | 23/73 (32%) |
DSRM | 250..316 | CDD:238007 | 23/65 (35%) | ||
DSRM | 394..460 | CDD:214634 | 18/68 (26%) | ||
Stau1 | NP_445888.1 | DSRM_SF | 1..70 | CDD:412133 | |
DSRM_SF | 95..167 | CDD:412133 | 24/75 (32%) | ||
DSRM_STAU1_rpt4 | 194..279 | CDD:380714 | 27/99 (27%) | ||
Staufen_C | 366..475 | CDD:374568 | 24/109 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166352097 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |