DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment loqs and Ilf3

DIOPT Version :9

Sequence 1:	NP_609646.1	Gene:	loqs / 34751	FlyBaseID:	FBgn0032515	Length:	465	Species:	Drosophila melanogaster
Sequence 2:	XP_008764212.1	Gene:	Ilf3 / 84472	RGDID:	619734	Length:	915	Species:	Rattus norvegicus

Alignment Length:	192	Identity:	53/192 - (27%)
Similarity:	76/192 - (39%)	Gaps:	27/192 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   136 PVSILQELLSRRGITPG--YELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAK-HAAA 197
            |...:..|:....:.||  |:|:...|.:|.|.|...|.....    |...:|.|||.|| |.|.
  Rat   417 PPQAMNALMRLNQLKPGLQYKLISQTGPVHAPIFTMSVEVDGS----TFEASGPSKKTAKLHVAV 477

  Fly   198 RALIDKLI--GAQLPES-------------PSSSAGPSVTGLTVAGSGGDGNANATGGGDASDKT 247
            :.|.|..:  ||:..:|             |:..|.|.|.......|....:...|..|....|.
  Rat   478 KVLQDMGLPTGAEGRDSSKGEDSAEESDGKPAVVAPPPVVEAVSNPSSVFPSDATTEQGPILTKH 542

  Fly   248 VGNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAA 309
            ..||:..|.|   :||  ...||..:|.|..|::.|.:...:...:..|.|.:||:||..||
  Rat   543 GKNPVMELNE---KRR--GLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAA 599

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM	136..204	CDD:214634	22/70 (31%)
		DSRM	250..316	CDD:238007	20/60 (33%)
		DSRM	394..460	CDD:214634
Ilf3	XP_008764212.1	DZF	106..360	CDD:128842
		DSRM_ILF3_rpt1	416..488	CDD:380739	22/74 (30%)
		DSRM_ILF3_rpt2	538..609	CDD:380741	21/67 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352147
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930