DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loqs and adad2

DIOPT Version :9

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:XP_687183.1 Gene:adad2 / 558824 ZFINID:ZDB-GENE-130530-788 Length:517 Species:Danio rerio


Alignment Length:364 Identity:75/364 - (20%)
Similarity:114/364 - (31%) Gaps:125/364 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 LSRRGI-TPGYELVQIEGAI-------HEPTFRF-RVSFKDKDTPFTAMGAGRSKKEAKHAAARA 199
            ::..|: |.|..|.::...:       .||||.. |.|.:.. ||.:.:...||..|...:....
Zfish     1 MANHGVSTEGKRLPRMAATLMMRFASEREPTFGIHRASLRPL-TPNSEIEDSRSAGEESQSTNPE 64

  Fly   200 L--IDKLIG----------AQLPESP------------SSSAGPSVTGLTVAGSGGDGNANATGG 240
            |  :|.:.|          .|.|:||            :|.:|.|::.:|...:..|...:||.|
Zfish    65 LHCLDDVEGQSSVGHQTQEVQSPDSPPQMEDLGSSSDVTSLSGWSLSSVTAPEATVDLLEDATDG 129

  Fly   241 GDASDKTVGNPIG-WLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIA 304
            ....|:..|.... |                        |:...|..|:         |:..|: 
Zfish   130 SLTRDQRTGVKFADW------------------------HKNRVTALCT---------GRFDKL- 160

  Fly   305 KRLAAHRMWMRLQETPIDSGKISDSICGELEGEPRSS-----ENYYGELKDISVPTLTTQHS--- 361
                       |:|.|......|......||.|.|.:     |||       .|..|.:..|   
Zfish   161 -----------LRECPEYHSTKSCFAAFVLEREVRDTGGQRCENY-------EVVALGSGQSCCS 207

  Fly   362 -------NKVSQFH------KTLKNATGKKLLKLQKT--CLKNNKIDYIKLLGEIATENQFEV-- 409
                   :.|...|      :.||....|:||.....  .:|...|     |..:..|...::  
Zfish   208 GWLSYTGSVVHDCHAIVIARRALKRYLYKQLLLFYSADPDMKQRSI-----LESVPAERLLQLKP 267

  Fly   410 -TYVDI-EEKTFSGQFQCLV-----QLSTLPVGVCHGSG 441
             .|:.: ..||..|..||:|     ..|.|.: .||..|
Zfish   268 HIYLHLYTNKTPKGAAQCIVLSQNSAYSALKL-QCHAKG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM 136..204 CDD:214634 17/70 (24%)
DSRM 250..316 CDD:238007 6/66 (9%)
DSRM 394..460 CDD:214634 14/57 (25%)
adad2XP_687183.1 A_deamin 198..509 CDD:280326 25/114 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594026
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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