DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and CG5641

DIOPT Version :10

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_650196.1 Gene:CG5641 / 41529 FlyBaseID:FBgn0038046 Length:396 Species:Drosophila melanogaster


Alignment Length:89 Identity:20/89 - (22%)
Similarity:31/89 - (34%) Gaps:32/89 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ALAGGSGLQGGV----------------GLMGVILP--------SDEAL--------KFVSETDA 128
            ||.||..::||:                .|..|..|        .|.||        :.:|.|.:
  Fly     5 ALRGGRPMRGGIRPPFKKTFVPRHPFDLTLAEVFFPKVPSAGAVDDSALTAALLKRNQDLSPTPS 69

  Fly   129 NGLAMKTPVSILQELLSRRGITPG 152
            ...|:...|:.:|.:|....:.||
  Fly    70 EQTAIGNLVTKVQAVLDNLVVAPG 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 5/19 (26%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692
DSRM_PRKRA-like_rpt3 393..463 CDD:380693
CG5641NP_650196.1 DZF 105..345 CDD:284860
Blue background indicates that the domain is not in the aligned region.

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