DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and Adat1

DIOPT Version :9

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001260450.1 Gene:Adat1 / 34787 FlyBaseID:FBgn0028658 Length:394 Species:Drosophila melanogaster


Alignment Length:145 Identity:26/145 - (17%)
Similarity:49/145 - (33%) Gaps:42/145 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 LQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYR---------EMGKGKSKKIAKRLAAH 310
            :.|:|:::      :|:..:.|.|....:||...|:.:.         .:|.|     .|.:...
  Fly    12 IAELCLKK------FESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCG-----TKCIGES 65

  Fly   311 RMWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKDISV----PTLTTQHSNKVSQFHKTL 371
            ::        ..:|.|.:....|:..........|.|||...:    .||:|...::..:||   
  Fly    66 KL--------CPNGLILNDSHAEVLARRGFLRFLYQELKQDRIFHWNSTLSTYDMDEHVEFH--- 119

  Fly   372 KNATGKKLLKLQKTC 386
                   .|..|..|
  Fly   120 -------FLSTQTPC 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM 136..204 CDD:214634
DSRM 250..316 CDD:238007 11/69 (16%)
DSRM 394..460 CDD:214634
Adat1NP_001260450.1 ADEAMc 7..389 CDD:214718 26/145 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467859
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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