DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and Adat1

DIOPT Version :10

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_609676.1 Gene:Adat1 / 34787 FlyBaseID:FBgn0028658 Length:394 Species:Drosophila melanogaster


Alignment Length:145 Identity:26/145 - (17%)
Similarity:49/145 - (33%) Gaps:42/145 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 LQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYR---------EMGKGKSKKIAKRLAAH 310
            :.|:|:::      :|:..:.|.|....:||...|:.:.         .:|.|     .|.:...
  Fly    12 IAELCLKK------FESLPKTGKPTANQWTILAGIVEFNRNTEACQLVSLGCG-----TKCIGES 65

  Fly   311 RMWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKDISV----PTLTTQHSNKVSQFHKTL 371
            ::        ..:|.|.:....|:..........|.|||...:    .||:|...::..:||   
  Fly    66 KL--------CPNGLILNDSHAEVLARRGFLRFLYQELKQDRIFHWNSTLSTYDMDEHVEFH--- 119

  Fly   372 KNATGKKLLKLQKTC 386
                   .|..|..|
  Fly   120 -------FLSTQTPC 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 11/69 (16%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693
Adat1NP_609676.1 ADEAMc 7..389 CDD:214718 26/145 (18%)
Blue background indicates that the domain is not in the aligned region.

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