DRSC/TRiP Functional Genomics Resources

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Protein Alignment loqs and zfr

DIOPT Version :10

Sequence 1:NP_609646.1 Gene:loqs / 34751 FlyBaseID:FBgn0032515 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_955852.2 Gene:zfr / 321659 ZFINID:ZDB-GENE-030131-378 Length:1074 Species:Danio rerio


Alignment Length:252 Identity:53/252 - (21%)
Similarity:85/252 - (33%) Gaps:62/252 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GSSLPQQ--LQNLHIQPQQASPNPVQTGFAPRRHYNNLVGLGNGNAVSGSPVKGAPLGQRHVKLK 70
            ||:..::  .||..::|:| .|.|      |:.||.::..:   :.......|....||:|   |
Zfish   298 GSTFTKKTPFQNKTLKPKQ-PPKP------PQIHYCDVCKI---SCAGPQTYKEHLEGQKH---K 349

  Fly    71 KEKISAQVAQLSQPGQLQLSDVGDPALAGGSGLQGGVGLMGVILPSDEALKFVSETDANGLAMKT 135
            |::.:.:|:|.|....           .|||..:|....:...|..      ||.|.|:..|   
Zfish   350 KKEAALKVSQSSSSSS-----------GGGSSARGTQNQLRCELCD------VSCTGADAYA--- 394

  Fly   136 PVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKKEAKHAAARAL 200
                                ..|.||.|:...:..... .|..|.|..........:..||....
Zfish   395 --------------------AHIRGAKHQKVVKLHTKL-GKPIPSTEPSVVSQSSTSSTAAPNKT 438

  Fly   201 IDKLIGAQLPESPSSSAGPSVTGL---TVAGSGGDG---NANATGGGDASDKTVGNP 251
            ....|.:....|.::|:..|.:.|   ::|.|...|   .||:.....:|.|.|..|
Zfish   439 SSSNINSSTSTSSNASSSVSASYLKSGSMAASAAQGKSSGANSVSVNSSSIKKVNTP 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
loqsNP_609646.1 DSRM_PRKRA-like_rpt1 134..206 CDD:380691 9/71 (13%)
DSRM_PRKRA-like_rpt2 250..316 CDD:380692 1/2 (50%)
DSRM_PRKRA-like_rpt3 393..463 CDD:380693
zfrNP_955852.2 ZnF_U1 324..353 CDD:197732 8/34 (24%)
C2H2 Zn finger 326..348 CDD:275371 3/24 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..374 11/43 (26%)
ZnF_U1 380..409 CDD:197732 10/57 (18%)
C2H2 Zn finger 380..402 CDD:275371 9/50 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..456 8/44 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 508..545
ZnF_U1 575..606 CDD:197732
C2H2 Zn finger 578..600 CDD:275371
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 697..718
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 761..781
DZF 784..1037 CDD:128842
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1036..1074
Blue background indicates that the domain is not in the aligned region.

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