Protein Alignment loqs and Adar

DIOPT Version :9

• Sequence 1: NP_609646.1
• Gene: loqs / 34751
• FlyBaseID: FBgn0032515
• Length: 465
• Species: Drosophila melanogaster
• Sequence 2: NP_001368969.1
• Gene: Adar / 31130
• FlyBaseID: FBgn0026086
• Length: 681
• Species: Drosophila melanogaster
• Alignment Length: 313
• Identity: 76/313 - (24%)
• Similarity: 113/313 - (36%)
• Gaps: 77/313 - (24%)

  Fly   134 KTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSKK----EAKH 194
            |..|::|.||  |.|:.  |:|....|.:|.|.|...|....:    ..:|.|||||    ||..
  Fly   105 KNTVAMLNEL--RHGLI--YKLESQTGPVHAPLFTISVEVDGQ----KYLGQGRSKKVARIEAAA 161

  Fly   195 AAARALIDKLIGAQLPESPSSSAG-------------PSVTGLTVAGSGGDGNANATGGGDASDK 246
            .|.|:.|....||.|  ||...||             .|.:.:||     ||.......|
  Fly   162 TALRSFIQFKDGAVL--SPLKPAGNLDFTSDEHLENDVSKSAITV-----DGQKKVPDKG----- 214

  Fly   247 TVGNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHR 311
                |:..|.|:     :...::|.....|..:...|.:..:|...:..|.|.|||.||..||..
  Fly   215 ----PVMLLYEL-----FNDVNFECINIDGAQNNCRFKMTVTINEKKFDGTGPSKKTAKNAAAKA 270

  Fly   312 MWMRLQETPIDSGKISDSICGELEGEPRSSENYYGELKDISVPTLTTQHSNKVSQFHKTLKNATG 376
            ...              |:| .:...|.....     |::.:|......|.::.|.|   .:..|
  Fly   271 ALA--------------SLC-NISYSPMVVPQ-----KNVPLPIDDKSSSMELPQIH---ADTIG 312

  Fly   377 KKLLKLQKTCLKNNKIDYIK---LLGEIATEN----QFEVTYVDIEEKTFSGQ 422
            :.:|:.....:|..:. |.:   |.|.:.|||    :.:|..|....|..||:
  Fly   313 RLVLEKFMEVIKGQEA-YSRRKVLAGIVMTENMNFCEAKVISVSTGTKCVSGE 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loqs	NP_609646.1	DSRM	136..204	CDD:214634	24/71 (34%)
		DSRM	250..316	CDD:238007	16/65 (25%)
		DSRM	394..460	CDD:214634	11/36 (31%)
Adar	NP_001368969.1	DSRM_STRBP_RED-like_rpt1	105..167	CDD:380694	24/69 (35%)
		DSRM_SF	213..>259	CDD:412133	10/59 (17%)
		ADEAMc	306..677	CDD:214718	15/63 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45467858
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930