| Sequence 1: | NP_609646.1 | Gene: | loqs / 34751 | FlyBaseID: | FBgn0032515 | Length: | 465 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_079579.2 | Gene: | Stau2 / 29819 | MGIID: | 1352508 | Length: | 570 | Species: | Mus musculus |
| Alignment Length: | 241 | Identity: | 64/241 - (26%) |
|---|---|---|---|
| Similarity: | 99/241 - (41%) | Gaps: | 56/241 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 125 ETDANGLAMKTPVSILQELLSRRGITPGYELVQIEGAIHEPTFRFRVSFKDKDTPFTAMGAGRSK 189
Fly 190 KEAKHAAARALIDKLIGAQLP-----ESPS----------SSAGPSVTGLTVAGSGGDGNANATG 239
Fly 240 GGDASDKTVGNPIGWLQEMCMQRRWPPPSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIA 304
Fly 305 KRLAAHRMWMRL-------QETPIDSGKISDSICGELEGEPRSSEN 343 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| loqs | NP_609646.1 | DSRM | 136..204 | CDD:214634 | 20/67 (30%) |
| DSRM | 250..316 | CDD:238007 | 23/65 (35%) | ||
| DSRM | 394..460 | CDD:214634 | |||
| Stau2 | NP_079579.2 | DSRM_STAU2_rpt1 | 3..70 | CDD:380709 | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 71..94 | ||||
| DSRM_STAU2_rpt2 | 98..179 | CDD:380711 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..203 | 0/1 (0%) | |||
| DSRM_STAU2_rpt3 | 206..272 | CDD:380713 | 21/69 (30%) | ||
| Nuclear localization signal 1 | 273..291 | 4/17 (24%) | |||
| DSRM_STAU2_rpt4 | 304..389 | CDD:380715 | 27/99 (27%) | ||
| Nuclear localization signal 2. /evidence=ECO:0000250 | 373..412 | 7/35 (20%) | |||
| Required for dendritic transport. /evidence=ECO:0000250 | 381..570 | 6/27 (22%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 381..413 | 6/27 (22%) | |||
| Staufen_C | 465..523 | CDD:374568 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 545..570 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167848545 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3732 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.740 | |||||